Pairwise Alignments
Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021
Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417
Score = 374 bits (960), Expect = e-107
Identities = 258/855 (30%), Positives = 426/855 (49%), Gaps = 69/855 (8%)
Query: 251 LEDIDERRRAADDLRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWL-ETTGQTEAEA 309
+ DI R+ L E E+ + + P ++V D F+ L T G +AE
Sbjct: 436 ISDITSRKLIELSLVERESFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGHTLGYNKAEL 495
Query: 310 LGFG---WVDVIHPDDRQAVQETFF--RATAGKEPVRSEYRLRRADGSWAWVIDVGQPRF 364
G W ++HP+D + + R ++ + R R + W D+ +
Sbjct: 496 QQMGEYFWEILLHPEDAEHYHDLRQQQRQIGYTTQLQCQLRFRHRNNQWRR-FDIREQAL 554
Query: 365 SADGT--FLGYVGSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLMNE 422
+ D T +G DIT++ A + ++++ R + +S D + D + ++
Sbjct: 555 ARDKTTQISRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVICSTDSQLALNYISP 614
Query: 423 AGRRIFGLNEGAPVTGQTWDSI-GRASDADKVEAAWESVRRG--------------KTAR 467
+ + G + V W SI + + E V R +T
Sbjct: 615 SVNAVLGYDVDW-VFKNGWQSIIANPQQLTGIYSLMEEVSRALGDPEALNKLRDEIQTQL 673
Query: 468 FEISVRDAGGEERCMDVISAPITDHHGKPFRILSIWRDITDAKRASDEISRAQRHAEAAA 527
F A G + +++ + D HG IL + RDI+ +RA ++ A
Sbjct: 674 FLFDCLRADGRKVPIELRMVLVWDEHGAFEGILGVGRDISQQRRAEKDLRMA-------- 725
Query: 528 DQLSSVLESTMDSVMLLDADWRVRYLNENARKLLQVG-DEALGRVFWKLFPEEEEGSFAK 586
++V E + ++++ D + NE ++ + L ++ L +E++ +
Sbjct: 726 ---ATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSDVLDQLPNMLTVDEQQEA--- 779
Query: 587 HCREVMDR-RVRSFFEDHLSSLGR-------WVEANASPTRDG----ISIFCRDITERRR 634
H R V+ + S +E + R WV A +G F DI+ER+
Sbjct: 780 HLRYVLKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKA 839
Query: 635 AEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEEALNESNHAR--MAVLCLDLDGFKA 692
+E+ ++ +A +D LT L NR F++ AL + + + ++ LDLD FK
Sbjct: 840 SEQ-------RIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKP 892
Query: 693 VNDTLGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAIIQPLTESRD----EAFRLA 748
+ND+LGH AGD +L++++TRL+ V +TVAR+GGDEF ++ +R+ A +A
Sbjct: 893 INDSLGHAAGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRVNREMALNRAIHVA 952
Query: 749 QRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYSAKSSGRGTYKL 808
++++ +L +PF +EG V SIGIA +P+DG +L+K AD A+Y AK G+ ++
Sbjct: 953 EQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQF 1012
Query: 809 FDVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPERGMI 868
+ M+A +++ +R AL + EF L+YQP S + + ++ EALLRWRHP RG++
Sbjct: 1013 YQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLV 1072
Query: 869 APSEFIPIAEETGLIVPIGEWILGEACRQAARWPER----VSVAVNLSPVQFKHRNLVRA 924
P +FIP+ EE GL+V +G+W++ EACRQ W + V+VN+S QF L
Sbjct: 1073 PPGDFIPVLEELGLVVDVGDWVISEACRQLKTWHQNKVRVPKVSVNISARQFSDGQLGTR 1132
Query: 925 VAKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYL 984
+A L T L PA L+LE+TE++L+ E +++L L+ LG+ IA+DDFGTGYSSL YL
Sbjct: 1133 IATILKDTGLPPACLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGYSSLNYL 1192
Query: 985 RSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVVDSEG 1044
+ FP D +K+D+ FV LP G++ I +A+ + SL + EGVET +QL + G
Sbjct: 1193 KQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHG 1252
Query: 1045 FNEVQGYLFSRPLPA 1059
+EVQGYLF RP+PA
Sbjct: 1253 CDEVQGYLFGRPMPA 1267
Score = 73.6 bits (179), Expect = 9e-17
Identities = 105/471 (22%), Positives = 183/471 (38%), Gaps = 48/471 (10%)
Query: 79 VLSTSEGHELEEQITTPDGTQRTLLTKKRCVSIPAGSTQEKFVVVTIVDITNLRRTEETL 138
VL+ ELE Q+ G ++ L R +P K V+++I DIT+ + E +L
Sbjct: 393 VLTQQHQLELEIQLKDVAGNEQYLWLVMR---LPEQPDDFKAVILSISDITSRKLIELSL 449
Query: 139 RASEEHYRSLVDLHPQVPWTADTAGEVL---------EVGPRWSELTGLGEKETLGSGWA 189
E + +V P + D + + +G +EL +GE W
Sbjct: 450 VERESFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGHTLGYNKAELQQMGEYF-----WE 504
Query: 190 KAVHPQDAGALQE--EWRRSLASGAPFDCEYRLLTKTGDYRWFRARAAA-KRDADGKIVR 246
+HP+DA + + +R + C+ R + +R F R A RD +I R
Sbjct: 505 ILLHPEDAEHYHDLRQQQRQIGYTTQLQCQLRFRHRNNQWRRFDIREQALARDKTTQISR 564
Query: 247 WYGVLEDIDERRRAADDLRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTE 306
GV +DI ++ A++ LR+SE R+R +A+ +I D ++ + G
Sbjct: 565 IIGVAKDITDQIEASESLRDSEQRYRMLAESISDVICSTDSQLALNYISPSVNAVLGYDV 624
Query: 307 AEALGFGWVDVIHPDDR----QAVQETFFRATAGKEPV---RSEYRLR-------RADGS 352
GW +I + ++ E RA E + R E + + RADG
Sbjct: 625 DWVFKNGWQSIIANPQQLTGIYSLMEEVSRALGDPEALNKLRDEIQTQLFLFDCLRADGR 684
Query: 353 WAWVIDVGQPRFSADGTFLGYVGSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRVLD 412
+ + G F G +G DI+++R AE + A ++F+ S + + D
Sbjct: 685 KVPIELRMVLVWDEHGAFEGILGVGRDISQQRRAEKDLRMAA----TVFEHSTSAILITD 740
Query: 413 MEGRPLLMNEAGRRIFGLNEGAPVTGQTWDSIGRASDADKVEAA-----WESVRRGKTAR 467
G + NEA R+ G D + D+ + A + + + T
Sbjct: 741 PAGYIVQANEAFSRVSGY-----AVSDVLDQLPNMLTVDEQQEAHLRYVLKQLHQHSTWE 795
Query: 468 FEISVRDAGGEERCMDVISAPITDHHGKPFRILSIWRDITDAKRASDEISR 518
E+ ++ GE V + D G + + DI++ K + I R
Sbjct: 796 GEVWLKRRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKASEQRIHR 846
Score = 55.1 bits (131), Expect = 3e-11
Identities = 102/471 (21%), Positives = 179/471 (38%), Gaps = 87/471 (18%)
Query: 258 RRAADDLRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDV 317
RR + E R++ I + V + V D G +FF++ LET Q A W+
Sbjct: 284 RRRQRQVHEGRRRYQDIFEGTGVALCVLDLMGLNAFFDKTRLETREQLHA------WLQD 337
Query: 318 IHPDDRQAVQETFFRATAGKEPVRSEYRLRRADGSWAWVID--------VGQPRFSADGT 369
HP++RQ + + + VR + + +W +ID +G A T
Sbjct: 338 -HPNERQQLLKELRITEVNQVAVRL-LNVGSCEEAWERLIDDCPRNVTSIGHQIVEAVLT 395
Query: 370 ---------------------------------FLGYVGSVLDITERRAAEIAQQEAQAF 396
F + S+ DIT R+ E++ E ++F
Sbjct: 396 QQHQLELEIQLKDVAGNEQYLWLVMRLPEQPDDFKAVILSISDITSRKLIELSLVERESF 455
Query: 397 IRSIFDSSPDCVRVLDM-EGRPLLMNEAGRRIFGLNEGA--PVTGQTWDSIGRASDADKV 453
+ + PD + V D+ R + N G N+ + W+ + DA+
Sbjct: 456 WSDVVRTVPDHLYVQDVISQRMIFSNHHLGHTLGYNKAELQQMGEYFWEILLHPEDAEHY 515
Query: 454 EAAWESVRR-GKTARFEISVR--DAGGEERCMDVISAPIT-DHHGKPFRILSIWRDITDA 509
+ R+ G T + + +R + R D+ + D + RI+ + +DITD
Sbjct: 516 HDLRQQQRQIGYTTQLQCQLRFRHRNNQWRRFDIREQALARDKTTQISRIIGVAKDITDQ 575
Query: 510 KRASDEISRAQRHAEAAADQLSSVLEST------------MDSVMLLDADWRVR----YL 553
AS+ + +++ A+ +S V+ ST +++V+ D DW + +
Sbjct: 576 IEASESLRDSEQRYRMLAESISDVICSTDSQLALNYISPSVNAVLGYDVDWVFKNGWQSI 635
Query: 554 NENARK------LLQVGDEALG--RVFWKLFPEEEEGSFAKHCREVMDRRVRSFFEDHLS 605
N ++ L++ ALG KL E + F C R+V L
Sbjct: 636 IANPQQLTGIYSLMEEVSRALGDPEALNKLRDEIQTQLFLFDCLRADGRKV----PIELR 691
Query: 606 SLGRWVEANASPTRDGISIFCRDITERRRAEEDTLLAQKQMAHMARHDMLT 656
+ W E A +GI RDI+++RRAE+D +A H ++T
Sbjct: 692 MVLVWDEHGAF---EGILGVGRDISQQRRAEKDLRMAATVFEHSTSAILIT 739