Pairwise Alignments
Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021
Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417
Score = 388 bits (997), Expect = e-111
Identities = 319/1045 (30%), Positives = 494/1045 (47%), Gaps = 66/1045 (6%)
Query: 62 DILPGEQADRIVSLDRIVLSTSEGHE-LEEQITTPDGTQRTLLTKKRCVSIPAGSTQEKF 120
D+L E + R+V VL+ + + I PDG+ L AG +
Sbjct: 79 DLLAPEDSARVVRAFHAVLAGEPFEQAMHHHIQWPDGSLHWLEINGSLAPDKAGRRR--- 135
Query: 121 VVVTIVDITNLRRTEETLRASEEHYRSLVDLHPQ-VPWTADTAGEVLEVGPRWSELTGLG 179
++ I +IT+ R E L SE+ + +L L P V T G + E + L G
Sbjct: 136 MIGVIREITHQRDRENALSHSEKRFATLFHLCPNMVLLTRQADGLISEANQYFEMLFGWP 195
Query: 180 EKETLGSG------WAKAVHPQDAGALQEEWRRSLASGAPFDCEYRLLTKTGDYRWFRAR 233
+ +G W HP+ L + +R G P E + G
Sbjct: 196 LADAIGRTTLDLGLWR---HPEQRAQLVKATQRK---GEPITMEVQFCASNGQIH-DGTL 248
Query: 234 AAAKRDADGKIVRWYGVLEDIDERRRAADDLRESEARFRAIADDAPVMIWVAD-PTGDTS 292
+A K + +G+ L D ER+ A L++S+ R D A + W PTG
Sbjct: 249 SAQKVELEGEAYLISTFL-DTTERKNAEQALKDSQERLDLALDSAQLGTWDWHIPTGMLY 307
Query: 293 FFNRLWLETTGQTEAEALGFGWVDVIHPDDRQAVQETFFRATAGKEPVRS---EYRLRRA 349
R E F PDD + +R T + P + YR+
Sbjct: 308 GSARAAQLHGLPPEPFHESFDAFFEGMPDDERESMRNAYR-TLREGPAGNYQLTYRVPME 366
Query: 350 DGSWAWVIDVGQPRFSADGTFLGYVGSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVR 409
DGS ++ + G L G++LDIT++ E ++ S+F SPD +
Sbjct: 367 DGSSRYLESRARLYRDEQGAPLRMAGTLLDITDQVEREQRLTASEEKFASLFQVSPDPIC 426
Query: 410 VLDMEGRPLL-MNEAGRRIFGLNEGAPVTGQTWDSIGRASDADKVEAAWESVRRGKTARF 468
V ++G + +N A + FG A V ++ + IG ++ K E V R +
Sbjct: 427 VTCLDGGTFIEINPAFTQTFGWT-AAEVIDKSAEQIGLWDESSKRLQRIERVIREQALSN 485
Query: 469 EISVRDAGGEERCMDVISAPITDHHGKPFRILSIWRDITDAKRASDEISRAQRHAEAAAD 528
V + VIS+ + +P I++ RDIT +R+ + +A+ +
Sbjct: 486 VAIVAHHKNGQALTCVISSRLIKVGDQPC-IVTTLRDITQQQRSEAAL-------KASEE 537
Query: 529 QLSSVLESTMDSVMLLDADWRVRYLNENARKLLQVG---DEALGRVFWKLFPEEEEGSFA 585
+ + S+ D++ + + D RY+ N G +EA+G +++ +E A
Sbjct: 538 KFAKAFHSSPDAISITERDTG-RYVEVNDGFCRLTGYRAEEAIGLTLYQIGIWADENQRA 596
Query: 586 KHCREVMDRRVRSFFE-------DHLSSLGRWVEANASPTRDGISIFCRDITERRRAEED 638
E+ + ++ E L ++ VE + + RD++ + A
Sbjct: 597 ALLAELQIKGRINYLEMLWHNKRGELLAVEVSVEPITLNETPCLLLTARDVSLLKNA--- 653
Query: 639 TLLAQKQMAHMARHDMLTGLANRMFFRECFEE--ALNESNHARMAVLCLDLDGFKAVNDT 696
Q Q+ H+A HD LT L NR + + AL + ++ R A+L LDLD FK +ND+
Sbjct: 654 ----QAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDS 709
Query: 697 LGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAII-QPLTESRDEAFRLAQRLIDTL 755
LGHP GD +L+ V+ RL +VR +TVARLGGDEF ++ L +R E Q L DTL
Sbjct: 710 LGHPVGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQELADTL 769
Query: 756 ----SEPFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYSAKSSGRGTYKLFDV 811
SEP ++G V SIG+A P+ G++ +L+K ADIALY AK SGR T ++F
Sbjct: 770 RELLSEPMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNTTQMFHN 829
Query: 812 AMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPERGMIAPS 871
+M +M+ +R AL++GEF +HYQP V + EAL+RW+HP+ G +PS
Sbjct: 830 SMQKTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGAQSPS 889
Query: 872 EFIPIAEETGLIVPIGEWILGEACRQAARW-------PERVSVAVNLSPVQFKHRNLVRA 924
EFI + E++GLI+ +G WIL EAC + P S+ VN+SP QF+ + V
Sbjct: 890 EFIKVLEDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQNDFVER 949
Query: 925 VAKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYL 984
V ++L +L + L+LEITE +++ + + ++ L++LGV AMDDFGTGYSSL YL
Sbjct: 950 VERSLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYL 1009
Query: 985 RSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVVDSEG 1044
+ P D +K+DQ+FVRD H I++A+ + +SL + EGVET+DQLA + G
Sbjct: 1010 KRLPVDALKIDQSFVRDATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLAFLQGLG 1069
Query: 1045 FNEVQGYLFSRPLPAAEISKLIAAG 1069
+ QGYL SRPLP + + AG
Sbjct: 1070 CHLYQGYLHSRPLPMIGFRERLLAG 1094
Score = 44.3 bits (103), Expect = 5e-08
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 8/176 (4%)
Query: 13 SHDLFQRLMDGIAEPVIIKD-DASRFVFINDAACDLLGKDRNQLIGRTDHDI-LPGEQAD 70
S + F L +P+ + D F+ IN A G ++I ++ I L E +
Sbjct: 410 SEEKFASLFQVSPDPICVTCLDGGTFIEINPAFTQTFGWTAAEVIDKSAEQIGLWDESSK 469
Query: 71 RIVSLDRIVLSTSEGHELEEQITTPDGTQRTLLTKKRCVSIPAGSTQEKFVVVTIVDITN 130
R+ ++R++ + + + +G T + R + + + +V T+ DIT
Sbjct: 470 RLQRIERVIREQALSN-VAIVAHHKNGQALTCVISSRLIKVG----DQPCIVTTLRDITQ 524
Query: 131 LRRTEETLRASEEHYRSLVDLHPQ-VPWTADTAGEVLEVGPRWSELTGLGEKETLG 185
+R+E L+ASEE + P + T G +EV + LTG +E +G
Sbjct: 525 QQRSEAALKASEEKFAKAFHSSPDAISITERDTGRYVEVNDGFCRLTGYRAEEAIG 580
Score = 38.5 bits (88), Expect = 3e-06
Identities = 77/366 (21%), Positives = 144/366 (39%), Gaps = 55/366 (15%)
Query: 314 WVDVIHPDDRQAVQETFFRATAGKEPVRS--EYRLRRADGSWAWVIDVGQPRFSADGTFL 371
++D++ P+D V F AG EP + ++ DGS W+ G G
Sbjct: 77 YLDLLAPEDSARVVRAFHAVLAG-EPFEQAMHHHIQWPDGSLHWLEINGSLAPDKAGR-R 134
Query: 372 GYVGSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLN 431
+G + +IT +R E A ++ ++F P+ V + L++EA + F +
Sbjct: 135 RMIGVIREITHQRDRENALSHSEKRFATLFHLCPNMVLLTRQADG--LISEANQ-YFEML 191
Query: 432 EGAPVTGQTWDSIGRAS--------DADKVEAAWESVRRGKTARFEISVRDAGGEERCMD 483
G P+ D+IGR + + + + R+G+ E+ + G+
Sbjct: 192 FGWPLA----DAIGRTTLDLGLWRHPEQRAQLVKATQRKGEPITMEVQFCASNGQIHD-G 246
Query: 484 VISAPITDHHGKPFRILSIWRDITDAKRASDEISRAQRHAEAAADQLSSVLESTMDSVML 543
+SA + G+ + ++S + D T+ K A + +Q + A +DS L
Sbjct: 247 TLSAQKVELEGEAY-LISTFLDTTERKNAEQALKDSQERLDLA-----------LDSAQL 294
Query: 544 LDADWRV----RYLNENARKLLQVGDEALGRVFWKLF---PEEEEGSFAKHCREVMDRRV 596
DW + Y + A +L + E F F P++E S R + +
Sbjct: 295 GTWDWHIPTGMLYGSARAAQLHGLPPEPFHESFDAFFEGMPDDERESMRNAYRTLREGPA 354
Query: 597 RSF-------FEDHLSSLGRWVEANASPTRDGISIFCR------DITERRRAEEDTLLAQ 643
++ ED S R++E+ A RD R DIT++ E+ ++
Sbjct: 355 GNYQLTYRVPMEDGSS---RYLESRARLYRDEQGAPLRMAGTLLDITDQVEREQRLTASE 411
Query: 644 KQMAHM 649
++ A +
Sbjct: 412 EKFASL 417