Pairwise Alignments

Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

Subject, 766 a.a., Sensory box/GGDEF family protein from Sphingobium sp. HT1-2

 Score =  363 bits (932), Expect = e-104
 Identities = 204/501 (40%), Positives = 298/501 (59%), Gaps = 22/501 (4%)

Query: 580  EEGSFAKHCREVMD--RRVRSFFEDHL----SSLGRWVEANASPTRD------GISIFCR 627
            E G FA     + D  +R  SF    L        RW+E +ASP  D      G      
Sbjct: 261  ESGRFASSLHSLADHLKRRESFSNLALPVDVQGRTRWLELSASPRYDDNGNFQGFRGVGS 320

Query: 628  DITERRRAEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEEALNESNHAR--MAVLCL 685
            DIT +R + +       ++A +AR D LTGL NR   R+  ++A+ ++ + R   A L L
Sbjct: 321  DITVQRESAD-------KIAQLARFDTLTGLPNRAHLRDALDQAMADTGNRRPGCAFLML 373

Query: 686  DLDGFKAVNDTLGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAIIQPLTESRDEAF 745
            DLD FKA+ND+LGH  GD LL QV+ RL           R+GGDEF ++    +      
Sbjct: 374  DLDRFKAINDSLGHQVGDQLLSQVAQRLRHVCGGAGFCGRIGGDEFGVVIARIDDDRAVA 433

Query: 746  RLAQRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYSAKSSGRGT 805
            RL+  +ID LS P+ I+    +VG S+G A +P DG  ++ +I++AD+ALY AK  G G 
Sbjct: 434  RLSIAIIDALSAPYQIDQHVLHVGASVGSAVSPIDGHQSESIIRSADLALYRAKDEGGGV 493

Query: 806  YKLFDVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPER 865
            +  ++  +HA+ +  Q+++  +R+AL K +  L YQP+V   S  ++  EAL RW HPE 
Sbjct: 494  HCPYEPQLHAKAEERQRLEQALREALEKDQLHLLYQPVVDATSGVITGFEALARWTHPEL 553

Query: 866  GMIAPSEFIPIAEETGLIVPIGEWILGEACRQAARWPERVSVAVNLSPVQFKHRNLVRAV 925
            G I PS+F+P+AEE  LI PIGEW+L  ACR+A RWP  + VAVN+S  Q    N + +V
Sbjct: 554  GPIPPSKFVPVAEEARLIGPIGEWVLRTACREAMRWPAHIRVAVNVSAEQLHQSNFISSV 613

Query: 926  AKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYLR 985
              AL+ + LD  RL+LE+TE+V + E +  L +L  L+ +G+++++DDFGTGYSSLGYL 
Sbjct: 614  INALAQSGLDARRLELEVTESVFMHEDDGALRVLDQLQAMGIQLSLDDFGTGYSSLGYLS 673

Query: 986  SFPFDKIKVDQAFVRDLPHG-KESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVVDSEG 1044
               F+ IK+D++FV    H   E+LAI++AV  L +SLGM+T+ EGVET  +L +V   G
Sbjct: 674  RTRFNTIKIDRSFVVGAAHNTPENLAIIRAVVTLAESLGMSTTAEGVETATELDMVRRLG 733

Query: 1045 FNEVQGYLFSRPLPAAEISKL 1065
              +VQGY + RP+   + ++L
Sbjct: 734  CKKVQGYYYGRPMLPQDAARL 754



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 23/161 (14%)

Query: 432 EGAPVT----GQTWDSIGRASDADKVEAAWESVRRGKTARFEISVRDAGGEERCMDVISA 487
           EGAP+     G  W+S   AS    +  A    RR   +   + V D  G  R +++ ++
Sbjct: 247 EGAPLVQVLAGAGWESGRFASSLHSL--ADHLKRRESFSNLALPV-DVQGRTRWLELSAS 303

Query: 488 PITDHHGKPFRILSIWRDITDAKRASDEISRAQR-----------HAEAAADQLSSVLES 536
           P  D +G       +  DIT  + ++D+I++  R           H   A DQ  +   +
Sbjct: 304 PRYDDNGNFQGFRGVGSDITVQRESADKIAQLARFDTLTGLPNRAHLRDALDQAMADTGN 363

Query: 537 TMD--SVMLLDADWRVRYLNENARKLLQVGDEALGRVFWKL 575
                + ++LD D R + +N++     QVGD+ L +V  +L
Sbjct: 364 RRPGCAFLMLDLD-RFKAINDSLGH--QVGDQLLSQVAQRL 401



 Score = 26.2 bits (56), Expect = 0.010
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 351 GSWAWVIDVGQPRFSADGTFLGYVGSVLDITERR--AAEIAQ 390
           G   W+     PR+  +G F G+ G   DIT +R  A +IAQ
Sbjct: 293 GRTRWLELSASPRYDDNGNFQGFRGVGSDITVQRESADKIAQ 334