Pairwise Alignments

Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  376 bits (965), Expect = e-108
 Identities = 268/894 (29%), Positives = 446/894 (49%), Gaps = 76/894 (8%)

Query: 215  DCEYRLLTKTGD--YRWFRARAAA-KRDADGKIVRWYGVLEDIDERRRAADDLRESEARF 271
            + E RL T  G   + W  AR    +RD    I+     + DI  R++    L E E+ +
Sbjct: 394  ELEVRLPTPQGTELHLWLMARLPLQRRDYQAVILS----ISDITSRKQVELSLLERESFW 449

Query: 272  RAIADDAPVMIWVAD-PTGDTSFFNRLWLETTGQTEAEALGFG---WVDVIHPDDRQAVQ 327
              +    P  ++V D P+    F NR   +T G    E    G   W  ++HP+D    Q
Sbjct: 450  SDVVRTVPDQLYVQDVPSQRMIFSNRHLGQTLGYDRTELAQMGDRFWELLLHPEDAAHYQ 509

Query: 328  --ETFFRATAGKEPVRSEYRLRRADGSWAWVIDVGQPRFS--ADGTFLGYVGSVLDITER 383
                  R     +P+  + R R  DGSW    D+ +   +  A+G     +G   D+T +
Sbjct: 510  ALRRQQRDNCHDQPLHCQLRFRHRDGSWR-CYDIREQVLTRNAEGLVTRIIGVGKDVTVQ 568

Query: 384  RAAEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLNEGAPVTGQTWDS 443
              A  + ++++   R + +S  D +   D + +   ++ + + + G  +   +    W S
Sbjct: 569  IEASQSLRDSEQRYRMLAESISDVIFSTDNQLKLNYVSPSVQSVLGY-QADWIFANGWQS 627

Query: 444  I--------GRASDADKVEAAW-------ESVRRGKTARFEISVRDAGGEERCMDVISAP 488
            I        G  S  ++V  A        +   +  T  F      A G +  +++    
Sbjct: 628  IVANPAQLTGIYSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRKIPIELRLVL 687

Query: 489  ITDHHGKPFRILSIWRDITDAKRASDEISRAQRHAEAAADQLSSVLESTMDSVMLLDADW 548
            + D   +   +L + RDI+  +RA  ++  A           ++V E +  ++++ D   
Sbjct: 688  VWDDDQRFEGVLGVGRDISQQRRAEKDLRMA-----------ATVFEHSTSAILITDPAG 736

Query: 549  RVRYLNENARKLLQVG-DEALGRVFWKLFPEEEEGSFAKHCREVMDRR--------VRSF 599
             +   NE   ++      E L ++   L  +E++    ++  + + +R        ++  
Sbjct: 737  YIVQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRR 796

Query: 600  FEDHLSSLGRWVEANASPTRDG----ISIFCRDITERRRAEEDTLLAQKQMAHMARHDML 655
              DH  +   WV   A    +G       F  DI+ER+ +E+       ++  +A +D L
Sbjct: 797  DGDHYPA---WVGITAVLDDEGDLASYVCFFTDISERKASEQ-------RIHRLAYYDAL 846

Query: 656  TGLANRMFFRECFEEALNESNHAR--MAVLCLDLDGFKAVNDTLGHPAGDALLRQVSTRL 713
            T L NR  F++    AL ++   +  + ++ LDLD FK +ND+LGH AGD +L+ ++ RL
Sbjct: 847  THLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALRL 906

Query: 714  IQAVRTTETVARLGGDEFAIIQPLTESRD----EAFRLAQRLIDTLSEPFSIEGAAANVG 769
            +  V   +TVAR+GGDEF ++     +R+     A  +A+ ++ +L  PF +E     V 
Sbjct: 907  LACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLENREFFVT 966

Query: 770  TSIGIAFAPEDGTSADELIKAADIALYSAKSSGRGTYKLFDVAMHAQLQAHQQMKITMRD 829
             SIGIA +P+DG+   +L+K AD A+Y AK  G+  ++ +   M+A      +++  +R 
Sbjct: 967  ASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLELESDLRH 1026

Query: 830  ALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPERGMIAPSEFIPIAEETGLIVPIGEW 889
            A+ + EF L+YQP  S + + ++  EALLRWRHP RG++ P +FIP+ EE GL+V +G+W
Sbjct: 1027 AMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDW 1086

Query: 890  ILGEACRQAARWPE---RV-SVAVNLSPVQFKHRNLVRAVAKALSATRLDPARLQLEITE 945
            +L EA RQ   W +   RV  V+VN+S  QF    L   +A  L  + L PA L+LE+TE
Sbjct: 1087 VLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPACLELELTE 1146

Query: 946  TVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHG 1005
            ++L+ E    L++L  L+ LG+ IA+DDFGTGYSSL YL+ FP D +K+D+ FV  LP G
Sbjct: 1147 SILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEG 1206

Query: 1006 KESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVVDSEGFNEVQGYLFSRPLPA 1059
            ++   I +A+  +  SL +    EGVET +QL  +   G +EVQGYLF RP+PA
Sbjct: 1207 EQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPA 1260



 Score = 51.6 bits (122), Expect = 4e-10
 Identities = 93/386 (24%), Positives = 140/386 (36%), Gaps = 50/386 (12%)

Query: 34  ASRFVFINDAACDLLGKDRNQLIGRTDHD---ILPGEQADRIVSLDRIVLSTSEGHELEE 90
           + R +F N      LG DR +L    D     +L  E A    +L R          L  
Sbjct: 467 SQRMIFSNRHLGQTLGYDRTELAQMGDRFWELLLHPEDAAHYQALRRQQRDNCHDQPLHC 526

Query: 91  QITTP--DGTQRTLLTKKRCVSIPAGSTQEKFVVVTIVDITNLRRTEETLRASEEHYRSL 148
           Q+     DG+ R    +++ ++  A     + + V   D+T      ++LR SE+ YR L
Sbjct: 527 QLRFRHRDGSWRCYDIREQVLTRNAEGLVTRIIGVG-KDVTVQIEASQSLRDSEQRYRML 585

Query: 149 VDLHPQVPWTADTAGEVLEVGPRWSELTGLGEKETLGSGWAKAV--HPQDAGALQEEWRR 206
            +    V ++ D   ++  V P    + G        +GW   V    Q  G      R 
Sbjct: 586 AESISDVIFSTDNQLKLNYVSPSVQSVLGYQADWIFANGWQSIVANPAQLTGIYSLMERV 645

Query: 207 SLASGAP----------------FDCEYRLLTKTGDYRWFRARAAAKRDADGKIVRWYGV 250
           S A G P                FDC    L   G       R     D D +     GV
Sbjct: 646 SKAMGDPAQMAQLCSQLPTQLFLFDC----LRADGRKIPIELRLVLVWDDDQRFEGVLGV 701

Query: 251 LEDIDERRRAADDLRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEAL 310
             DI ++RRA  DLR +   F    + +   I + DP G     N  +   +G   +E L
Sbjct: 702 GRDISQQRRAEKDLRMAATVF----EHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVL 757

Query: 311 GF--GWVDVIHPDD---RQAVQETFFRATAGKEPVRSEYRLRRADG----SWAWVIDVGQ 361
               G + V    +   R  V++   R +        E  L+R DG    +W  +  V  
Sbjct: 758 DQLPGMLTVDEQQEGHLRYVVKQLHQRGS-----WEGEVWLKRRDGDHYPAWVGITAV-- 810

Query: 362 PRFSADGTFLGYVGSVLDITERRAAE 387
                +G    YV    DI+ER+A+E
Sbjct: 811 --LDDEGDLASYVCFFTDISERKASE 834