Pairwise Alignments

Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

Subject, 779 a.a., diguanylate cyclase from Agrobacterium fabrum C58

 Score =  373 bits (958), Expect = e-107
 Identities = 199/443 (44%), Positives = 277/443 (62%), Gaps = 12/443 (2%)

Query: 627  RDITERRRAEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEEAL-NESNHARMAVLCL 685
            RD+TE+R A       Q+++ ++ARHD+LTGL+NR  F+    + + N       A+L L
Sbjct: 338  RDLTEKREA-------QREIEYLARHDVLTGLSNRTMFQTRLHQQIDNGDEEDEFALLAL 390

Query: 686  DLDGFKAVNDTLGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAIIQPLTESRDEAF 745
            DLD FKAVND  GH  GD +L++V+  L +  R  + VARLGGDEF I+       DEA 
Sbjct: 391  DLDRFKAVNDIFGHAEGDRVLKKVAAILDECARAGDVVARLGGDEFVILTARHTKADEAR 450

Query: 746  RLAQRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYSAKSSGRGT 805
             LA+ ++   +   ++      VG SIGIA  P DG   + ++ AAD+ALY AK  GRG 
Sbjct: 451  LLAETILGMFALKMNVVNDPTAVGVSIGIAVFPRDGQDHESIMHAADLALYRAKMGGRGI 510

Query: 806  YKLFDVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPER 865
               +D  M  + +  +Q++  +R A+ + E  L+YQP++S+E   V   EAL+RW+HP R
Sbjct: 511  LAFYDPLMDQEARERRQLETDLRLAINRDELVLNYQPVLSVECGQVVGYEALVRWQHPTR 570

Query: 866  GMIAPSEFIPIAEETGLIVPIGEWILGEACRQAARWPERVSVAVNLSPVQFKHRNLVRAV 925
            G++ P  FIPIAEE+G+I+ +GEW+L EACRQA+ W   + +AVN+SP+QF   NL   V
Sbjct: 571  GVVPPDVFIPIAEESGIIISLGEWVLREACRQASTWAPHLKIAVNVSPLQFSLANLGHVV 630

Query: 926  AKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYLR 985
               L  T L P RL+LEITE  LL + +  L +L  L+ LGV I MDDFGTGYSSL  L+
Sbjct: 631  CTVLMQTGLSPNRLELEITEAALLKDRKATLVILNQLKALGVAIVMDDFGTGYSSLSNLQ 690

Query: 986  SFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVVDSEGF 1045
            SFPFDKIK+D++F+  +     + AIV+AV GLG+SL +  + EG+ET+ Q  +V  EG 
Sbjct: 691  SFPFDKIKIDRSFIAAMSEDDNARAIVRAVIGLGRSLDLPVTAEGIETDAQYRMVVDEGC 750

Query: 1046 NEVQGYLFSR----PLPAAEISK 1064
             + QGYLF R    P PAA  +K
Sbjct: 751  AQAQGYLFGRPDVAPAPAASTAK 773



 Score = 33.9 bits (76), Expect = 5e-05
 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 17/142 (11%)

Query: 397 IRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLNEGAPVTGQTWDSIGRASDADKVEAA 456
           ++ + D++ D + V+  +GR + +N     + G  E A + G+  D + +A D      +
Sbjct: 243 LKGLVDATLDGLAVV-RDGRIVELNTRFAGLLGREE-ASLVGRNPDDLFKAVDGQPTYLS 300

Query: 457 WESVRRGKTARFEISVRDAGGEERCMDVISAPITDHHGKPFRILSIWRDITDAKRASDEI 516
                  + A  E ++R+ GG+ +  + +     ++ G+P  +++I RD+T+ + A  EI
Sbjct: 301 -------RPAPVE-AIRERGGQAQVFE-LGVRTIEYRGRPCEVMAI-RDLTEKREAQREI 350

Query: 517 SRAQRHAEAAADQLSSVLESTM 538
               RH     D L+ +   TM
Sbjct: 351 EYLARH-----DVLTGLSNRTM 367



 Score = 26.6 bits (57), Expect = 0.008
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 16  LFQRLMDGIAEPVIIKDDASRFVFINDAACDLLGKDRNQLIGRTDHDI 63
           L    +DG+A   +++D   R V +N     LLG++   L+GR   D+
Sbjct: 246 LVDATLDGLA---VVRD--GRIVELNTRFAGLLGREEASLVGRNPDDL 288