Pairwise Alignments

Query, 404 a.a., NuoD2 NADH I chain D from Sinorhizobium meliloti 1021

Subject, 594 a.a., NADH:ubiquinone oxidoreductase from Pseudomonas simiae WCS417

 Score =  337 bits (864), Expect = 6e-97
 Identities = 168/389 (43%), Positives = 244/389 (62%), Gaps = 1/389 (0%)

Query: 16  NTKEVLLNLGPQHPSTHGVLRLVLQLDGEYVERVDPHIGYLHRGTEKLAESFTYTQIFPL 75
           N   + LNLGP HPS HG  R++LQLDGE +    P IGY HRG EK+AE  ++    P 
Sbjct: 207 NEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPY 266

Query: 76  TDRLDYLCPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARISGHLLITGALPMDLG 135
           TDR+DYL    NNL + L+VEKL GI+ P R   IR+MMAE  RI+ HLL  G    D+G
Sbjct: 267 TDRIDYLGGVMNNLPYVLSVEKLAGIKVPDRVDTIRIMMAEFFRITSHLLFLGTYIQDVG 326

Query: 136 AMTALLYAMREREMIMDLLEMITGARMHTSYCRVGGVREDLPDGFLPKIREFCEIFPNRI 195
           AMT + +   +R+    ++E ITG R+H ++ R+GGV  DLP+G+   ++EF +  P R+
Sbjct: 327 AMTPVFFTFTDRQRAYKVIEAITGFRLHPAWYRIGGVAHDLPNGWDRLVKEFIDWMPKRL 386

Query: 196 RDYERLIENNRVFLSRTQGVGVISATDAIDLGLSGPNLRASGVDWDIRRDEPYEIYDRLD 255
            +Y++   +N +   RT GV   +  +A++ G++G  LR++G D+D+R+  PY  Y+  +
Sbjct: 387 DEYQKAALDNSILKGRTIGVAQYNTKEALEWGVTGAGLRSTGCDFDLRKARPYSGYENFE 446

Query: 256 FDVITREEGDCYSRWLCRVDEMRESIRLIEQCMEQMPEGPFQVDIPTIAFPVDKERVHCS 315
           F+V     GD Y R + RV+EMR+S+++IEQCM  MP GP++ D P +  P  KER    
Sbjct: 447 FEVPLAANGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHP-LTTPPPKERTLQH 505

Query: 316 MEALIQHFDLSAYGFDVPAGEVYSVIEAPKGELGFYIISDGSPKPFRMKVRAPSFVNLQA 375
           +E LI HF   ++G  +PA E + +IEA KG   +Y+ SDG    +R ++R PSF +LQ 
Sbjct: 506 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSFAHLQQ 565

Query: 376 LFGVTNARYLADMIAVLGSLDPVMAEVDK 404
           +  V     +AD+IA LGS+D VMA+VD+
Sbjct: 566 IPSVIKGEMVADLIAYLGSIDFVMADVDR 594