Pairwise Alignments

Query, 404 a.a., NuoD2 NADH I chain D from Sinorhizobium meliloti 1021

Subject, 417 a.a., NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) from Variovorax sp. SCN45

 Score =  399 bits (1026), Expect = e-116
 Identities = 197/414 (47%), Positives = 270/414 (65%), Gaps = 28/414 (6%)

Query: 18  KEVLLNLGPQHPSTHGVLRLVLQLDGEYVERVDPHIGYLHRGTEKLAESFTYTQIFPLTD 77
           K   LN GPQHP+ HGVLRLVL+LDGE ++R DPHIG LHR TEKLAES T+ Q  P  D
Sbjct: 5   KNYTLNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAESRTFIQSLPYMD 64

Query: 78  RLDYLCPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARISGHLLITGALPMDLGAM 137
           RLDY+   SN  A+ LA+E+++G+E PIRAQYIRVM AE+ R+  HLL  GA  +D GAM
Sbjct: 65  RLDYVSMMSNEHAYCLAIERMMGLEVPIRAQYIRVMFAEITRLLNHLLWLGAHGLDCGAM 124

Query: 138 TALLYAMREREMIMDLLEMITGARMHTSYCRVGGVREDLPD------------------- 178
             L+Y  RERE + DL E ++GARMH +Y R GGV  DLPD                   
Sbjct: 125 NMLIYCFREREDLFDLYEAVSGARMHAAYFRPGGVYRDLPDAMPQYKVSKIKNAKAIEKL 184

Query: 179 ------GFLPKIREFCEIFPNRIRDYERLIENNRVFLSRTQGVGVISATDAIDLGLSGPN 232
                   L  + +FC+ FP  + +YE L+ +NR++  RT G+GV++   A++LG +GP 
Sbjct: 185 NENRQGSMLDFVDDFCKRFPKMVDEYETLLTDNRIWKQRTVGIGVVTPERALNLGFTGPM 244

Query: 233 LRASGVDWDIRRDEPYEIYDRLDFDVITREEGDCYSRWLCRVDEMRESIRLIEQCME--Q 290
           LR SG++WD+R+ +PY++YDR+ FDV   + GDCY R+L RV+EMR++ R+I+QC    +
Sbjct: 245 LRGSGIEWDLRKKQPYDVYDRMQFDVPVGKTGDCYDRYLVRVEEMRQANRIIQQCSAWLR 304

Query: 291 MPEGPFQVDIPTIAFPVDKERVHCSMEALIQHFDLSAYGFDVPAGEVYSVIEAPKGELGF 350
              GP   D   +A P  +E +  +ME LI HF L   GF VP GE Y+ +E PKGE G 
Sbjct: 305 ANPGPVITDNHKVAAPA-RESMKANMEELIHHFKLFTEGFHVPEGEAYAAVEHPKGEFGI 363

Query: 351 YIISDGSPKPFRMKVRAPSFVNLQALFGVTNARYLADMIAVLGSLDPVMAEVDK 404
           Y++SDG+ KP+R+K+RAP F +L AL  ++    +AD +AV+G++D V  E+D+
Sbjct: 364 YLVSDGANKPYRLKIRAPGFPHLAALDEMSRGHMIADAVAVIGTMDIVFGEIDR 417