Pairwise Alignments

Query, 404 a.a., NuoD2 NADH I chain D from Sinorhizobium meliloti 1021

Subject, 411 a.a., NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score =  374 bits (961), Expect = e-108
 Identities = 191/405 (47%), Positives = 255/405 (62%), Gaps = 2/405 (0%)

Query: 1   MTEVTELMRPEGEALNTKEVLLNLGPQHPSTHGVLRLVLQLDGEYVERVDPHIGYLHRGT 60
           M  VT+   P       +   +N GPQHP+ HGVLRLV++LDGE VER DPH+G LHRGT
Sbjct: 8   MDHVTDAADPAYGDTEIQNYTINFGPQHPAAHGVLRLVMELDGEIVERCDPHVGLLHRGT 67

Query: 61  EKLAESFTYTQIFPLTDRLDYLCPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARI 120
           EKL E  TY Q  P  DRLDY  P     ++ LAVEKLL +E P+RAQY+RV  AEL RI
Sbjct: 68  EKLIEHKTYMQALPYFDRLDYCSPLGMEHSYVLAVEKLLNLEVPLRAQYLRVFFAELTRI 127

Query: 121 SGHLLITGALPMDLGAMTALLYAMREREMIMDLLEMITGARMHTSYCRVGGVREDLPDGF 180
             H+L  G+  MD+GAMT  L+    RE  ++  E  +GARMH++Y R GGV +D+P   
Sbjct: 128 CNHMLNLGSHVMDVGAMTPNLWLFEIREDCLNFFERASGARMHSAYFRPGGVHQDVPLKL 187

Query: 181 LPKIREFCEI-FPNRIRDYERLIENNRVFLSRTQGVGVISATDAIDLGLSGPNLRASGVD 239
           L  I ++ +   P    D   L+ +NR+F  R   + ++S  DA+  G SGP LR SG+ 
Sbjct: 188 LTDIADWLDTRLPRLFEDAMSLVVDNRIFKQRNVDISIVSKEDALKWGFSGPMLRGSGIA 247

Query: 240 WDIRRDEPYEIYDRLDFDVITREEGDCYSRWLCRVDEMRESIRLIEQCMEQMPEGPFQVD 299
           WDIR+ +PY++YDR++FDV      DCY R++ RV+E+R+S R+++QC+ +MPEGP    
Sbjct: 248 WDIRKAQPYDVYDRMEFDVPVGTAFDCYDRFMVRVEEVRQSARIMKQCLSEMPEGPI-AS 306

Query: 300 IPTIAFPVDKERVHCSMEALIQHFDLSAYGFDVPAGEVYSVIEAPKGELGFYIISDGSPK 359
                 P  +  +  SMEALI HF L   GF VPAGEVY   E+PKGE G Y++SDGS K
Sbjct: 307 FDRKVSPPKRGEMKKSMEALIHHFKLYTEGFHVPAGEVYVATESPKGEFGVYLVSDGSNK 366

Query: 360 PFRMKVRAPSFVNLQALFGVTNARYLADMIAVLGSLDPVMAEVDK 404
           P+R K+R  +F +LQA+  +     LAD  AVLG++D V  E D+
Sbjct: 367 PYRCKIRPTAFSHLQAMDFMMKGHMLADTTAVLGAMDIVFGECDR 411