Pairwise Alignments

Query, 404 a.a., NuoD2 NADH I chain D from Sinorhizobium meliloti 1021

Subject, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

 Score =  334 bits (856), Expect = 5e-96
 Identities = 168/392 (42%), Positives = 242/392 (61%), Gaps = 1/392 (0%)

Query: 13  EALNTKEVLLNLGPQHPSTHGVLRLVLQLDGEYVERVDPHIGYLHRGTEKLAESFTYTQI 72
           +  N   + LNLGP HPS HG  R+VLQLDGE +    P IGY HRG EK+AE  ++   
Sbjct: 203 QGANEDYMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSF 262

Query: 73  FPLTDRLDYLCPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARISGHLLITGALPM 132
            P TDR+DYL    NNL + LAVEKL GI+ P +   IR+M+AE  RI+ HLL  G    
Sbjct: 263 IPYTDRIDYLGGVMNNLPYVLAVEKLAGIKVPQKVDVIRIMLAEFFRITSHLLFLGTYIQ 322

Query: 133 DLGAMTALLYAMREREMIMDLLEMITGARMHTSYCRVGGVREDLPDGFLPKIREFCEIFP 192
           D+GAMT + +   +R+    ++E ITG R+H ++ R+GGV  DLP G+   +++F E  P
Sbjct: 323 DVGAMTPVFFTFTDRQRAYTVIEAITGFRLHPAWYRIGGVAHDLPRGWDKLVKDFVEWLP 382

Query: 193 NRIRDYERLIENNRVFLSRTQGVGVISATDAIDLGLSGPNLRASGVDWDIRRDEPYEIYD 252
            R+ +Y +    N +   RT GV   +  +A++ G +G  LRA+G ++D+R+  PY  Y+
Sbjct: 383 KRLDEYTKAALQNSILKGRTIGVAAYNTKEALEWGTTGAGLRATGCNFDLRKARPYSGYE 442

Query: 253 RLDFDVITREEGDCYSRWLCRVDEMRESIRLIEQCMEQMPEGPFQVDIPTIAFPVDKERV 312
             +F+V     GD Y R + RV+EMR+SIR+I+QC+  MPEGP++ D P +  P  KER 
Sbjct: 443 NFEFEVPLAHNGDAYDRCMVRVEEMRQSIRIIDQCLRNMPEGPYKADHP-LTTPPPKERT 501

Query: 313 HCSMEALIQHFDLSAYGFDVPAGEVYSVIEAPKGELGFYIISDGSPKPFRMKVRAPSFVN 372
              +E LI HF   ++G  +PA E + +IEA KG   +Y+ SDG    +R ++R PS+ +
Sbjct: 502 LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPH 561

Query: 373 LQALFGVTNARYLADMIAVLGSLDPVMAEVDK 404
           LQ +  V     +AD+IA LGS+D VMA+VD+
Sbjct: 562 LQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593