Pairwise Alignments

Query, 404 a.a., NuoD2 NADH I chain D from Sinorhizobium meliloti 1021

Subject, 417 a.a., NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  385 bits (990), Expect = e-112
 Identities = 192/414 (46%), Positives = 264/414 (63%), Gaps = 28/414 (6%)

Query: 18  KEVLLNLGPQHPSTHGVLRLVLQLDGEYVERVDPHIGYLHRGTEKLAESFTYTQIFPLTD 77
           K   LN GPQHP+ HGVLRLVL+LDGE V+R DPHIG LHR TEKLAE  TY Q  P  D
Sbjct: 5   KNYTLNFGPQHPAAHGVLRLVLELDGEVVQRADPHIGLLHRATEKLAEHKTYIQSLPYMD 64

Query: 78  RLDYLCPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARISGHLLITGALPMDLGAM 137
           RLDY+    N  A+ LA+EKLLGIE PIRAQYIRVM +E+ R+  HL+  G+   D G+ 
Sbjct: 65  RLDYVSMMCNEHAYCLAIEKLLGIEVPIRAQYIRVMFSEITRLLNHLMWLGSHGNDCGSS 124

Query: 138 TALLYAMREREMIMDLLEMITGARMHTSYCRVGGVREDLPD------------------- 178
           T L+YA RERE + D+ E ++GARMH +Y R GGV  DLPD                   
Sbjct: 125 TILIYAFREREDLFDMYEAVSGARMHAAYFRPGGVYRDLPDSMPQYKANKIRNARALADM 184

Query: 179 ------GFLPKIREFCEIFPNRIRDYERLIENNRVFLSRTQGVGVISATDAIDLGLSGPN 232
                   L  I +F   FP  + +Y  L+ +NR++  RT G+GV++   A++LG++GP 
Sbjct: 185 NTNRQGSLLDFIDDFTRRFPTYLAEYHTLLTDNRIWKQRTVGIGVVTPERALNLGMTGPM 244

Query: 233 LRASGVDWDIRRDEPYEIYDRLDFDVITREEGDCYSRWLCRVDEMRESIRLIEQCME--Q 290
           LR SG+ WD+R+ +PY++Y ++DFD+   + GDCY R+L R++EM++S R+IEQC +  +
Sbjct: 245 LRGSGIAWDLRKKQPYDVYGQMDFDIPVGKTGDCYDRYLVRMEEMKQSNRIIEQCSKWLR 304

Query: 291 MPEGPFQVDIPTIAFPVDKERVHCSMEALIQHFDLSAYGFDVPAGEVYSVIEAPKGELGF 350
              GP   D   +A P  +E +  +ME LI HF L   GF VP GE Y+ +E PKGE G 
Sbjct: 305 ANPGPVITDNHKVAAPA-REAMKANMEELIHHFKLFTEGFHVPEGEAYAAVEHPKGEFGI 363

Query: 351 YIISDGSPKPFRMKVRAPSFVNLQALFGVTNARYLADMIAVLGSLDPVMAEVDK 404
           Y++SDG+ KP+R+K+RAP F +L  +  +     LAD +A++G++D V  E+D+
Sbjct: 364 YLVSDGANKPYRLKIRAPGFAHLATMDEMARGHMLADAVAIIGTMDIVFGEIDR 417