Pairwise Alignments

Query, 404 a.a., NuoD2 NADH I chain D from Sinorhizobium meliloti 1021

Subject, 575 a.a., hydrogenase large subunit from Dickeya dianthicola ME23

 Score =  166 bits (419), Expect = 2e-45
 Identities = 118/383 (30%), Positives = 186/383 (48%), Gaps = 31/383 (8%)

Query: 24  LGPQHPSTHGVLRLVLQLDGEYVERVDPHIGYLHRGTEKLAES-FTYTQIFPLTDRLDYL 82
           +GP H ++       L +DGE +   D  + Y+HRG EKLAE+   Y ++  L+DR+  +
Sbjct: 190 IGPLHITSDEPGHFRLFVDGEQIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGI 249

Query: 83  CPPSNNLAFALAVEKLLGIEAPIRAQYIRVMMAELARISGHLLITGALPMDLGAMTALLY 142
           C  ++++A+  ++E  LG+  P RA  IR ++ E+ R+  HLL  G     +G  T  + 
Sbjct: 250 CGFTHSVAYTSSIENALGVVVPARAHTIRSILLEVERLHSHLLNIGLSSHFVGFDTGFMQ 309

Query: 143 AMREREMIMDLLEMITGARMHTSYCRVGGVRED-LPDGFLPKIREFCEIFPNRIRDYERL 201
             R RE  M + EM+TGAR       +GG+R D L +  L  IR   E+    +     +
Sbjct: 310 FFRVREKSMQIAEMLTGARKTYGLNLIGGIRRDILKEDRLKTIRLIREM-REEVTQLTDM 368

Query: 202 IENNRVFLSRTQGVGVISATDAIDLGLSGPNLRASGVDWDIRRDEPYEIYDRLDFDVITR 261
           + N      RTQGVGV++   A D    GP +RASG   D+R D P+  Y  L  ++   
Sbjct: 369 LLNTANMAQRTQGVGVLNRQVARDYSPVGPMIRASGFQRDVRIDHPFAGYLDLPMELHHL 428

Query: 262 EEGDCYSRWLCRVDEMRESIRLIEQCMEQMPEGPFQVDIPTIAFPVDKERVHCSMEALIQ 321
           + GD YSR L RV E+  S+ +IE  ++ MP+GP                       L +
Sbjct: 429 DGGDVYSRVLVRVREVFTSLAMIEFGLDNMPDGPI----------------------LNE 466

Query: 322 HFDLSAYGFDVPAGEVYSVIEAPKGELGFYIISDGSPKPFRMKVRAPSFVNLQALFGVTN 381
           H +   + F           EAP+GE   + ++  + K FR + RA ++ N   L  +  
Sbjct: 467 HINYQPHKF------ALGFTEAPRGEDIHWSMTGDNQKLFRWRCRAATYANWPVLRFMLR 520

Query: 382 ARYLADMIAVLGSLDPVMAEVDK 404
              ++D   ++GSLDP  +  D+
Sbjct: 521 GNTISDAPLIIGSLDPCYSCTDR 543