Pairwise Alignments

Query, 429 a.a., Permease, MFS from Sinorhizobium meliloti 1021

Subject, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

 Score =  124 bits (311), Expect = 5e-33
 Identities = 102/371 (27%), Positives = 157/371 (42%), Gaps = 31/371 (8%)

Query: 23  MALCVAVLIASEFMPVSLLTPIARDLGMSEGEAGQAISISGLFAVLTSLFIAGFTRKIDR 82
           +AL    +  +EF+ + LL  +A DLG+S   AG  ++   L   + + F+A  T K+ R
Sbjct: 8   LALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATAKLPR 67

Query: 83  KFVLSSFSLMLIVSGLVVSFAPNYTALMVGRALLGVAIGGFWSMSTAVVMRLLPESAVPE 142
           K  L +   + I+  L+ + A +Y  LM  R +  +  G F+ + + V   L+P +    
Sbjct: 68  KAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLVPANKRAS 127

Query: 143 GLALLNAGNAIAATISAPLGSFLGDYIGWRGAFFFVVPLALIALIGQWTNMPSLPPRNRR 202
            +AL+  G  +A  +  PLG+ LG   GWR  F+ V  + ++ALIG    +P+     + 
Sbjct: 128 AVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPAKRDEEKL 187

Query: 203 ATGNVFRLLARRQVALGMTAILLLFMGQFALFTYLRPFLESAAGFSVSGLSLVLLLMGLA 262
                   L    + L ++   L     F LFTY+ P L    G S  G++  LLL+GL 
Sbjct: 188 DMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTLLLIGLG 247

Query: 263 GVAGTWCISRLLVTRLYSIVIAIPLVMAA----------------IALTLMAVGSKLPVA 306
              G     +L   RL + +I + + MA                 I L L A  S   V 
Sbjct: 248 LTVGNIIGGKLADKRLAATLIGVFISMAVVSTALTWTSVAVIPTEITLFLWATASFAAVP 307

Query: 307 ALLIAWGFFGTAAPVGWGTWLSRVLHDDAEAGGGLQVAVIQFAIAIGAAAGGLLFDWAGW 366
           AL I    FG AAP    T               L +       A+GA  GG +      
Sbjct: 308 ALQINVVTFGKAAPNLVST---------------LNIGAFNIGNALGAWVGGSVIAHGFG 352

Query: 367 WSSFAFAAALL 377
            +    AAA+L
Sbjct: 353 LTRVPLAAAVL 363