Pairwise Alignments

Query, 318 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 321 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  101 bits (252), Expect = 2e-26
 Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 33/320 (10%)

Query: 1   MFPNFPLMAFSSVIEPLRAANT-LSGRRCYSWLTVAAGE-KISASNGIGIEPDFHVRNAP 58
           +FP    +  +  ++    AN  LS +  Y    +  G   ++ASNG+ ++   H   A 
Sbjct: 9   IFPGVQSLDVTGPLDVFCEANRFLSPQDHYQLDVIGLGHGSMAASNGLSLQAHRHYSEAL 68

Query: 59  EVDRIVVCSGGDA---EHLVADEEMAWIRKNLRAGAQLGAVADAAFFLARKGLLDGHSCT 115
           +   +++ +GG     E   A+ +  W+R       + G++ + AF LAR GLLDG + T
Sbjct: 69  QAYDLLLVAGGPQLPFEDFGAEFD-DWLRSATARAQRFGSICNGAFMLARAGLLDGKTVT 127

Query: 116 LHWTSQPAFKEAFPHLDMRSD-LYVIDRRRFTSVGGIGSLDMMLDMIGRDYGAELADGVA 174
            HW          P   + +D LYV D   +TS G    +D+ L ++ +D+G E+A  VA
Sbjct: 128 THWNDAADLARLCPTAQVDADRLYVQDGNLYTSAGVTAGIDLSLYLLAQDHGPEVALSVA 187

Query: 175 GWFMHSPLRPDADRRKLTLRIRSGIADDL---------VLSAVAMME----DAIEDVLRI 221
                        +R +    RSG                SAVA+++      +   L I
Sbjct: 188 -------------KRLVVFTQRSGGQSQFSPFLTPHAETTSAVALVQLYVLANLTGDLTI 234

Query: 222 EDLASRLNVSSDKLERAFKAELGVSPNSYYRNLRLGHAADMLTHSNLKVNEVAVACGFVN 281
            DLA   N+S+    R F  E  ++P  +    R+  A  ML  S   +  VA  CGF +
Sbjct: 235 ADLAKAANMSARNFSRVFAREARITPAEFVERARVDAARVMLESSRAPLKTVAYQCGFRD 294

Query: 282 AANFSRAFKEQFGYVPHSVR 301
           A +    F  + G  P   R
Sbjct: 295 AQHMRSVFNRRLGVTPQQFR 314