Pairwise Alignments

Query, 318 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 324 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Variovorax sp. SCN45

 Score =  105 bits (263), Expect = 1e-27
 Identities = 82/314 (26%), Positives = 144/314 (45%), Gaps = 13/314 (4%)

Query: 3   PNFPLMAFSSVIEPLRAANTLSGRRCYSWLTVAAGE-KISASNGIGIEPDFHVRNAPE-- 59
           P   L+  S  ++    AN  +  + Y  L VA+    + +S+G+ + PD  + +A    
Sbjct: 13  PGVQLLDVSGPLDVFAEANLQAKAQAYRLLVVASKRGPVRSSSGVRLMPDATIGDAMHEP 72

Query: 60  VDRIVVCSGGDAEHLVADEEM-AWIRKNLRAGAQLGAVADAAFFLARKGLLDGHSCTLHW 118
           +  ++V     A    +D  + AW+++      + G+V   AF LA+ GLL+G   T HW
Sbjct: 73  IHTLLVAGSPHAADAASDANVSAWLKQQTPKLRRFGSVCSGAFVLAQAGLLNGRRVTTHW 132

Query: 119 TSQPAFKEAFPHLDMRSD-LYVIDRRRFTSVGGIGSLDMMLDMIGRDYGAELADGVAGWF 177
                    +P + + +D ++V D R  T+ G    LD+ L ++  D G ++A  VA   
Sbjct: 133 AVAEQLARDYPSVTVDADAIHVRDGRLRTAAGVTAGLDLSLALVEEDLGRDIAMKVAAQL 192

Query: 178 MHSPLRPDADRRKLTLRIRSGIADDLVLSAVAMMEDAIE----DVLRIEDLASRLNVSSD 233
           +    RP    +      R G A     SA+  ++  I         + +LA+R+ +S  
Sbjct: 193 VMFFKRPGGQMQFS----RKGEAAPTGRSALQEVQRWIAANPAQDHGVANLAARMGLSER 248

Query: 234 KLERAFKAELGVSPNSYYRNLRLGHAADMLTHSNLKVNEVAVACGFVNAANFSRAFKEQF 293
              R F+ E+GV+P ++  ++R+  A  +L   +    +VA  CGF +A    RAF+   
Sbjct: 249 HFARLFRQEVGVTPAAWVEDVRVTAARRLLEAGDAAPKQVAFQCGFADADTLRRAFQRHV 308

Query: 294 GYVPHSVRRRVSRA 307
           G  P   R+R + A
Sbjct: 309 GITPAEYRKRFAHA 322