Pairwise Alignments

Query, 318 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 339 a.a., HTH-type transcriptional regulator CdhR from Azospirillum sp. SherDot2

 Score =  214 bits (545), Expect = 2e-60
 Identities = 111/304 (36%), Positives = 180/304 (59%), Gaps = 3/304 (0%)

Query: 1   MFPNFPLMAFSSVIEPLRAANTLSGRRCYSWLTVA-AGEKISASNGIGIEPDFHVRNAPE 59
           + P+F ++AF++ +EPLR AN +SG+  Y W+ ++  G    ASNGIGI  D  + + P 
Sbjct: 20  LVPDFSMIAFTAAVEPLRLANHISGKELYRWVLLSPTGGVQRASNGIGICVDHAIADCPP 79

Query: 60  VDRIVVCSGGDAEHLVADEEM-AWIRKNLRAGAQLGAVADAAFFLARKGLLDGHSCTLHW 118
           +  ++VCSG    H   D  M +W+R++   G   GA+  A+  LAR GLL+G+ CT+HW
Sbjct: 80  LSTVMVCSGIGG-HWYEDRAMFSWMRRSAAQGIAFGALCTASHILARAGLLNGYRCTIHW 138

Query: 119 TSQPAFKEAFPHLDMRSDLYVIDRRRFTSVGGIGSLDMMLDMIGRDYGAELADGVAGWFM 178
            +   F E FP ++   +L+ IDR RFT  GG  + DMML +I   +G +LA  +A   +
Sbjct: 139 ENMAGFAETFPEIEATGELFTIDRNRFTCAGGTAATDMMLHLIAARHGEKLAMDIAEQLL 198

Query: 179 HSPLRPDADRRKLTLRIRSGIADDLVLSAVAMMEDAIEDVLRIEDLASRLNVSSDKLERA 238
           H+ +R  + R++  L+    +  + + +AVA+M+  IE+ L +  LA+ L  S   LER 
Sbjct: 199 HTKIRAGSIRQQEELQANPVLDHEDLHAAVAVMQANIEEPLDLLTLAAELGQSRRNLERL 258

Query: 239 FKAELGVSPNSYYRNLRLGHAADMLTHSNLKVNEVAVACGFVNAANFSRAFKEQFGYVPH 298
           F+  +  SP  YY  LR+  A  +L  + + V EV+++CGF++A +FS+ +++ FG  P 
Sbjct: 259 FRKYMNCSPAKYYLGLRMKRARQLLCQTRMSVMEVSISCGFISATHFSKCYRDHFGIAPR 318

Query: 299 SVRR 302
           S R+
Sbjct: 319 SDRQ 322