Pairwise Alignments

Query, 220 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

Subject, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  127 bits (320), Expect = 1e-34
 Identities = 70/197 (35%), Positives = 119/197 (60%), Gaps = 7/197 (3%)

Query: 21  HISIVFLAVGIAIATAVPIGVAITQSKST--ADTVLYLASMMITVPSIALFGLMIPLLSP 78
           H+ +V +++  A+   +P G+ +++      A+  + + ++  TVP +A+  + + +L  
Sbjct: 45  HLILVLVSMLAALVVGIPAGILLSRPNMVGRAERFMQIFNIGNTVPPLAVLAIALGVL-- 102

Query: 79  IGHGIGYVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPLA 138
              GIG  PA+ A+ L S LPI+RNTY  + NV  +L+EAA G+GM+  Q L +VE+P A
Sbjct: 103 ---GIGSGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPNA 159

Query: 139 IPVIMAGVRTAVVMNIGVTAIAAYIGAGGLGTFISRGISQSDPRQLVTGALAVSLLAIAA 198
           +P+I+ GVR A+ +N+G   +A  IGA  LG+ I  GI+ ++  QL+ GA   +LLA+  
Sbjct: 160 VPIIIGGVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLL 219

Query: 199 DLFLALVQRLLTSRGIQ 215
           D  + +  RL   RG++
Sbjct: 220 DGLVTMASRLWLERGLR 236