Pairwise Alignments

Query, 220 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

Subject, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

 Score =  108 bits (269), Expect = 2e-28
 Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 5/178 (2%)

Query: 22  ISIVFLAVGIAIATAVPIGVAITQSKSTADTVLYLASMMITVPSIALFGLMIPLLSPIGH 81
           +S+V  ++   +   +P+GV +  S      +  +   M T P+   F  ++P++   G 
Sbjct: 167 LSLVLTSLVFCMVIGLPLGVLLASSDRAQRIMRPVLDAMQTTPA---FVYLVPVVMLFG- 222

Query: 82  GIGYVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPLAIPV 141
            IG VP V+  I+++  P++R T   +  V P L EAA+  G S WQ L +V++PLA+P 
Sbjct: 223 -IGNVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPS 281

Query: 142 IMAGVRTAVVMNIGVTAIAAYIGAGGLGTFISRGISQSDPRQLVTGALAVSLLAIAAD 199
           IMAG+  A+++++ +  IA+ I  GGLG  + RGI + D      G L + LLAI+ D
Sbjct: 282 IMAGINQALMLSLSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGLGIVLLAISLD 339