Pairwise Alignments

Query, 220 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

Subject, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

 Score =  142 bits (357), Expect = 2e-38
 Identities = 80/190 (42%), Positives = 117/190 (61%), Gaps = 4/190 (2%)

Query: 20  EHISIVFLAVGIAIATAVPIGVAITQSKSTADTVLYLASMMITVPSIALFGLMIPLLSPI 79
           +H+ +V L+VGIAI   VPI + +         VL  AS++ TVPS+AL  ++I +L   
Sbjct: 314 QHLFLVALSVGIAILIGVPIAILVFPHVRLRAVVLGFASLLQTVPSLALLAVLISMLG-- 371

Query: 80  GHGIGYVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPLAI 139
              IG +PA++A+ LYS LPI+RNT T +  V   LR A   +GM+  Q LR V +PLA+
Sbjct: 372 --AIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLRLVLLPLAL 429

Query: 140 PVIMAGVRTAVVMNIGVTAIAAYIGAGGLGTFISRGISQSDPRQLVTGALAVSLLAIAAD 199
           P ++AGVRTA  + IG   IAA+IGAGG G  I  G++ +D   L+ GAL  + LA+ ++
Sbjct: 430 PTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDRELLLAGALPAAALALVSE 489

Query: 200 LFLALVQRLL 209
               L++ L+
Sbjct: 490 GVFELIEFLM 499