Pairwise Alignments

Query, 220 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

Subject, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  137 bits (345), Expect = 3e-37
 Identities = 79/224 (35%), Positives = 126/224 (56%), Gaps = 12/224 (5%)

Query: 1   MEIVRFIIDNLDIIGTRTIEHISIVFLAVGIAIATAVPIGVAITQSKSTADTVLYLASMM 60
           + IV+   +  D+  T    H+++   ++  A    +P+G+   + +     VL + + +
Sbjct: 170 LSIVKEYANRADLFWTEAGRHVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAI 229

Query: 61  ITVPSIALFGLMI----------PLLSPIG-HGIGYVPAVVAVILYSQLPIIRNTYTAIT 109
            T+PSIALFG++I          P  + IG  GIG  PA VA+ LYS LP++ NT   + 
Sbjct: 230 QTIPSIALFGILIAPLGWIAANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLA 289

Query: 110 NVDPALREAAKGMGMSTWQRLRQVEIPLAIPVIMAGVRTAVVMNIGVTAIAAYIGAGGLG 169
            V  A  +AA+G+GM+  QRL  +E PLA PVI+ G+R  +V NIG+  IAA IG GG G
Sbjct: 290 GVPHAANDAARGIGMTDRQRLVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFG 349

Query: 170 TFISRGISQSDPRQLVTGALAVSLLAIAADLFL-ALVQRLLTSR 212
            F+ +G+ Q+    ++ GA+   +LA  A + L AL++  + +R
Sbjct: 350 VFVFQGVGQTAMDLVLLGAIPTVVLAFTAAIVLDALIEMTMPNR 393