Pairwise Alignments

Query, 220 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

Subject, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  132 bits (333), Expect = 4e-36
 Identities = 73/205 (35%), Positives = 121/205 (59%), Gaps = 7/205 (3%)

Query: 12  DIIGTRTIEHISIVFLAVGIAIATAVPIGVAITQSKST--ADTVLYLASMMITVPSIALF 69
           D +G     H+ +V  ++  A+A  +P G+A+++      A+  +   ++  T+P +A+ 
Sbjct: 46  DDLGFYLQAHLVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVL 105

Query: 70  GLMIPLLSPIGHGIGYVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQR 129
            + + +L     GIG  PA+ A+ L S LPI+RNTY  + NV  +L+EAA G+GM+  Q+
Sbjct: 106 AIALSIL-----GIGAGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQ 160

Query: 130 LRQVEIPLAIPVIMAGVRTAVVMNIGVTAIAAYIGAGGLGTFISRGISQSDPRQLVTGAL 189
           L QVE+P A+P+I+ GVR A+ +N+G   +A  IGA  LG+ I  GI+ ++  QL+ GA 
Sbjct: 161 LWQVELPNAVPIIVGGVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAA 220

Query: 190 AVSLLAIAADLFLALVQRLLTSRGI 214
             +LLA+  D  ++   R    RG+
Sbjct: 221 CTALLALVLDAAVSFSSRRWLERGL 245