Pairwise Alignments

Query, 220 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

Subject, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 5/182 (2%)

Query: 18  TIEHISIVFLAVGIAIATAVPIGVAITQSKSTADTVLYLASMMITVPSIALFGLMIPLLS 77
           T+E ++ V  A  + +   VP+G+           +  +  +M TVP+   F  +IP L+
Sbjct: 91  TMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPT---FVYLIPTLT 147

Query: 78  PIGHGIGYVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPL 137
             G  +G VP +++ ++++    IR TY  I +V   L +A K  G S  Q L ++E+P 
Sbjct: 148 LFG--LGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAGKAFGCSRRQLLTRIELPH 205

Query: 138 AIPVIMAGVRTAVVMNIGVTAIAAYIGAGGLGTFISRGISQSDPRQLVTGALAVSLLAIA 197
           A+P I AGV   +++++ +  IAA +GA GLG  +   ++ +D        LA+ LLAI 
Sbjct: 206 AMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADISLGFEAGLAIVLLAIM 265

Query: 198 AD 199
            D
Sbjct: 266 LD 267