Pairwise Alignments

Query, 220 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

Subject, 385 a.a., predicted transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  125 bits (315), Expect = 8e-34
 Identities = 70/220 (31%), Positives = 121/220 (55%), Gaps = 11/220 (5%)

Query: 1   MEIVRFIIDNLDIIGTRTIEHISIVFLAVGIAIATAVPIGVAITQSKSTADTVLYLASMM 60
           + +++   +  D+      +H++++F AV  A+   VP+G+    S +    +  L +++
Sbjct: 160 LSLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVI 219

Query: 61  ITVPSIALFGLMI----------PLLSPIG-HGIGYVPAVVAVILYSQLPIIRNTYTAIT 109
            TVPS+ALFGL+I          P L  +G  G G  PA++A++LY+ LP++R     + 
Sbjct: 220 QTVPSVALFGLLIAPLAALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLN 279

Query: 110 NVDPALREAAKGMGMSTWQRLRQVEIPLAIPVIMAGVRTAVVMNIGVTAIAAYIGAGGLG 169
            +   + E+A+ MGMS  QR   V++PLA+PV +  +R  +V  +G+  IAA IGAGG G
Sbjct: 280 QIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGGFG 339

Query: 170 TFISRGISQSDPRQLVTGALAVSLLAIAADLFLALVQRLL 209
             + +G+  S    ++ G + V +LA+  D    L+  LL
Sbjct: 340 ALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALL 379