Pairwise Alignments

Query, 251 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

 Score =  134 bits (338), Expect = 1e-36
 Identities = 79/200 (39%), Positives = 121/200 (60%), Gaps = 7/200 (3%)

Query: 53  LTVQHLELVAWAGGLAILVAVPVGIVLSRPAFRLVSEAVMQVFNIGSTVPTLAILALSMT 112
           LT QH+ LV  A  LAIL+ VP+GI+++R  F  ++  +     +  TVP++A+  L + 
Sbjct: 18  LTGQHITLVGIAVILAILIGVPLGILMTR--FPTLAGPLQASATVLLTVPSIALFGLLLP 75

Query: 113 LL-----GIGTVPAVFGLWAATLLPIVRNTYAGLRAVPPHLVEAATGMGMTPRQVLWRVE 167
                  G+G +PA+  ++  +LLPI+RNTY  L  V P + EAA G+GMT  Q L  VE
Sbjct: 76  FYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLRMVE 135

Query: 168 LPNALFVIFGGIRTALAICVGSAPLVFLIGAGGLGELIFTGISLDELPMMMAGAIPTAML 227
           LP A+ VI  G+RTA+ + +G   +   IGAGGLG LI   IS  ++ M++ GA+  ++L
Sbjct: 136 LPIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLVSLL 195

Query: 228 AVLVDFIVGQIQYYLVPRGI 247
           A+  D ++  +Q  L P+G+
Sbjct: 196 AIFADLLLQWLQRSLTPKGL 215