Pairwise Alignments

Query, 251 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 1e-38
 Identities = 88/202 (43%), Positives = 131/202 (64%), Gaps = 4/202 (1%)

Query: 46  YSDDISYLTVQHLELVAWAGGLAILVAVPVGIVLSRPAFRLVSEAVMQVFNIGSTVPTLA 105
           +  D+  L  QHL LVA + G+AIL+ VP+ I++  P  RL +  V+   ++  TVP+LA
Sbjct: 304 FGPDLWKLARQHLFLVALSVGIAILIGVPIAILVF-PHVRLRA-VVLGFASLLQTVPSLA 361

Query: 106 ILALSMTLLG-IGTVPAVFGLWAATLLPIVRNTYAGLRAVPPHLVEAATGMGMTPRQVLW 164
           +LA+ +++LG IG +PA+  L   +LLPI+RNT  GL  VP  L  A T +GMTP Q L 
Sbjct: 362 LLAVLISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLR 421

Query: 165 RVELPNALFVIFGGIRTALAICVGSAPLVFLIGAGGLGELIFTGISLDELPMMMAGAIPT 224
            V LP AL  +  G+RTA AI +G+A +   IGAGG GE I TG++L++  +++AGA+P 
Sbjct: 422 LVLLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDRELLLAGALPA 481

Query: 225 AMLAVLVDFIVGQIQYYLVPRG 246
           A LA++ + +   I+ +L+ RG
Sbjct: 482 AALALVSEGVFELIE-FLMRRG 502