Pairwise Alignments

Query, 251 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 2e-26
 Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)

Query: 13  RRRIETAPLIVLIVLAGTVALLWWSGMAEEILAYSDDISYLTVQHLELVAWAGGLAILVA 72
           R  + +A L+ L+ L G + L  W  +               +Q L LV  + GL +LV 
Sbjct: 71  RSLLRSAVLVALLALIGMLGL--WDKL---------------LQTLALVLVSTGLCVLVG 113

Query: 73  VPVGIVLSRPAFRLVSEAVMQVFNIGSTVPTLAILALSMTLLGIGTVPAVFGLWAATLLP 132
           VP+GI+L+  A  L    ++ V ++  T+P    L   + L G+G VPAVF      L P
Sbjct: 114 VPLGILLA--ARPLARRLLLPVLDVMQTLPAFVYLIPVLMLFGLGKVPAVFATLIYALPP 171

Query: 133 IVRNTYAGLRAVPPHLVEAATGMGMTPRQVLWRVELPNALFVIFGGIRTALAICVGSAPL 192
           +VR T  GL  + P L++AA G+G +  Q L R+ LP AL  I  G+  ++ + +    +
Sbjct: 172 LVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVV 231

Query: 193 VFLIGAGGLGELIFTGISLDELPMMMAGAIPTAMLAVLVDFI 234
             +IGA GLGE +  GI    +   M   +    LA+++D I
Sbjct: 232 ASMIGARGLGEDVLAGIQTLNVGQGMEAGLAIVALAMVIDRI 273