Pairwise Alignments

Query, 251 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 381 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

 Score =  111 bits (278), Expect = 2e-29
 Identities = 80/250 (32%), Positives = 125/250 (50%), Gaps = 31/250 (12%)

Query: 15  RIETAP----LIVLIVLAGTVALL---WWSGMA--EEILAYSDDISYLTVQHLELVAWAG 65
           R+E  P    L++L+ +A   A+L    W+ ++  +E    +D      V+H+EL   + 
Sbjct: 121 RLEPKPAIRILLLLLAIAALSAILASGLWNDLSIIKEYTGRADIFWIEAVRHVELAIGSL 180

Query: 66  GLAILVAVPVGIVLSRPAFRLVSEAVMQVFNIGSTVPTLAILALSMTLLG---------- 115
             A +  +P+GI+  +     +   V+   NI  T+P++A+  L +  LG          
Sbjct: 181 IAATVAGIPLGILCYK--VERLRAGVLNSLNIVQTIPSIALFGLLIAPLGWIAATVPGAA 238

Query: 116 ------IGTVPAVFGLWAATLLPIVRNTYAGLRAVPPHLVEAATGMGMTPRQVLWRVELP 169
                 IG  PA   L+  +LLP+V NT  GL  V   + EAA G+GMTP Q L RVE P
Sbjct: 239 RIGIAGIGMAPAFVALFLYSLLPVVSNTVVGLAGVSHAIREAARGLGMTPVQRLLRVEFP 298

Query: 170 NALFVIFGGIRTALAICVGSAPLVFLIGAGGLGELIFTGISLDELPMMMAGAIPTAML-- 227
            A+ VI  GIR  L   +G A +  LIG GG G  +F GI    + +++ G +PT +L  
Sbjct: 299 LAMPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGIGQTAMDLVLLGTVPTVLLGF 358

Query: 228 --AVLVDFIV 235
             A+ +D ++
Sbjct: 359 AAAITLDALI 368