Pairwise Alignments

Query, 296 a.a., ABC transporter from Sinorhizobium meliloti 1021

Subject, 313 a.a., putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  231 bits (589), Expect = 2e-65
 Identities = 125/291 (42%), Positives = 182/291 (62%), Gaps = 4/291 (1%)

Query: 6   KLAKTLLSAAAIALVTTTAWAATITVGGKNFTEQLIIAEITKQLLESKGHTVDKKDGMGT 65
           ++A  L +A   A     A    I +G + FTEQ ++AEIT Q L + G  V    G+G+
Sbjct: 14  RIALLLGAALLFAGFAQAAEKPLIRIGARVFTEQTVLAEITAQYLRANGFDVRVIGGLGS 73

Query: 66  KIVRAALENGEVDLYWEYTGTSLITFNKVTERL-SPEETYNRVKELDGEKGLVWLAPSAA 124
            + R A E G++DL WEYTG SL+++N + ER+ S E TY +VKELD +K L+WL PS  
Sbjct: 74  SLARQAQETGQLDLMWEYTGVSLVSYNHIDERMPSAEATYAKVKELDAKKDLIWLTPSKF 133

Query: 125 NNTYAYVVKPGNAKT-EGMETISDLAKAYNDGK--DILMGTTAEFPKRPDGLIGLEKVYG 181
           +NTYA  +    A+    + +ISDL +   D +  + L+    EF  RPDGL+GL+++Y 
Sbjct: 134 SNTYALGLPKQVAEAYPQINSISDLNQVLRDERKRNHLVALDTEFANRPDGLVGLKEMYD 193

Query: 182 FETGRANVRPMDLGLAYNALANGDLDTIAAQATDGQIAALGLKTLKDDKGFFPNYALTPV 241
            + GRAN+R MD GL Y A+ N  +       TDG+++A  LK L+DDK +FP+Y   PV
Sbjct: 194 LQVGRANIRQMDAGLVYTAMHNNQVFAGLVYTTDGRLSAFNLKLLEDDKHYFPDYTAAPV 253

Query: 242 VRKEVLDANPDLKETLETVSKKLDDATMQRLNSQVDVEKKTIETVAADYLK 292
           VRK VLDANP L   L+ ++++LDD TM++LN++VDV+ +    VAA +L+
Sbjct: 254 VRKAVLDANPQLVALLKPLAEQLDDETMRQLNAKVDVDHQNPTAVAAAFLR 304