Pairwise Alignments

Query, 502 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  131 bits (330), Expect = 5e-35
 Identities = 117/376 (31%), Positives = 177/376 (47%), Gaps = 28/376 (7%)

Query: 23  AAQSASEIKIVLPEQPANLEPCGTIITNVGQILSRNVVEPLTIIDPKSGQPTPGLATEWK 82
           A    + + I +P +P  L+P     + + +I   N+ E LT ++   G  TP LA  W 
Sbjct: 26  AQAGKNTLTIGMPLEPPGLDPTTGAASAIAEITQYNIFETLTKVNA-DGSVTPMLAESWS 84

Query: 83  QT-DPNTWQLKLREGVKFQDGAAFDAEAVKFSIERMTGGKLTCSNIAKFGDAKLTVTPLD 141
            + D  T+  KLR+GV+F++   F+A  VKFS +R  G K T  +   F +    V  LD
Sbjct: 85  SSPDMKTFVFKLRKGVRFENDQPFNAHTVKFSFDRAGGAKSTNKDKRFFSEIGTVV--LD 142

Query: 142 ELTVEIKSDKPQPILPTLL--SVVMIVSPNTPADKAVNDPVGTGPFKLSSF-TPQTVVLE 198
           E TV + S  P P LP +L  S   IV P + AD     PVGTGP+KLS++    +  L 
Sbjct: 143 EYTVGVNSTLPNPDLPFMLGQSTACIVEPKS-ADTNATAPVGTGPYKLSAWQRGASCTLV 201

Query: 199 AFDGYWGEKPA-IAKASYVWRPESSIRAAMVETGEADLTPSIAIQDAT----NPETDFAY 253
               Y  +  A + K  + +  +++ + A +   + D+ P    +       NP      
Sbjct: 202 KSPSYRDQNLAKVPKFVFRFMSDTAAQTAALMANDIDIFPRAGTRSVAQFKGNPRFQVIE 261

Query: 254 LNSETTAI-RIDAGFAPLDDVRIRKALNLAIDWD----GLAQLFGEDVQRASQMVVTGIN 308
           + +    I  I+    PLDDVR+R+A+  AID +    G A  FG+ +     M   G  
Sbjct: 262 VGTRGKVILTINNRKKPLDDVRVRRAILAAIDRNAIIQGAADGFGKPIGSHYAM---GAP 318

Query: 309 GHDDKLAPWTFDAEKARALIAEAKAAGVPVDTEIEL-IGRNGIYPNGTEAMEAMMAMWQD 367
           G  D  A   FD EKA+ L+AE   AGV    E+ L +        G E + A +A    
Sbjct: 319 GFVDTTAMNPFDIEKAKKLLAE---AGVKTPLELRLQLPPPSYARQGGEMIAAQLA---Q 372

Query: 368 VGLNVKLTMLDVNDWL 383
           +G+NVK+  ++   WL
Sbjct: 373 IGINVKIQNVEWAQWL 388