Pairwise Alignments

Query, 502 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 505 a.a., ABC transporter substrate binding protein (dipeptide) from Agrobacterium fabrum C58

 Score =  427 bits (1097), Expect = e-124
 Identities = 229/492 (46%), Positives = 320/492 (65%), Gaps = 5/492 (1%)

Query: 14  VVAGWAGYAAAQSAS-EIKIVLPEQPANLEPCGTIITNVGQILSRNVVEPLTIIDPKSGQ 72
           V+A  +G A A +AS +IKIVLPE+   LEPC    +N+G+++  NV E LT +D +  Q
Sbjct: 14  VLAFGSGIAPANAASTDIKIVLPEEADLLEPCMATRSNIGRVIMENVSETLTELDVRGKQ 73

Query: 73  PT-PGLATEWKQTDPNTWQLKLREGVKFQDGAAFDAEAVKFSIERMTGGKLTCSNIAKFG 131
              P LA +W+QT  + W+  LR+GVKF DG  F A+ VK+S +R+   K  C +   FG
Sbjct: 74  GVMPRLAEKWEQTGDSAWRFHLRQGVKFSDGKTFGAKDVKYSFDRIFSDKNICESRRYFG 133

Query: 132 DAKLTVTPLDELTVEIKSDKPQPILPTLLSVVMIVSPNTPADKAVNDPVGTGPFKLSSFT 191
             K  V  +D+ T++ K D  QPILP LLS+V IV   TP    V +P+GTGP+KLS++T
Sbjct: 134 GMKFDVKVVDDNTIDFKVDPVQPILPLLLSLVTIVPDGTPL-AFVREPIGTGPYKLSNWT 192

Query: 192 P-QTVVLEAFDGYWGEKPAIAKASYVWRPESSIRAAMVETGEADLTPSIAIQDATNPETD 250
           P Q +VL+A D YWG+KPA+ KA+Y++R + ++RAAMV+ GEADL PSI+  DATN +TD
Sbjct: 193 PGQQIVLDARDDYWGKKPAVTKATYLFRADPAVRAAMVQAGEADLAPSISQVDATNDKTD 252

Query: 251 FAYLNSETTAIRIDAGFAPLDDVRIRKALNLAIDWDG-LAQLFGEDVQRASQMVVTGING 309
           F+YL+SET  +R+D   APL+DVR+RKALNLAID    +  L  +D   A+ +V     G
Sbjct: 253 FSYLDSETVYLRLDGNIAPLNDVRVRKALNLAIDRQAFIGTLVPQDAVLATALVPPTTLG 312

Query: 310 HDDKLAPWTFDAEKARALIAEAKAAGVPVDTEIELIGRNGIYPNGTEAMEAMMAMWQDVG 369
            +  +  + +D ++A+ L+ EAKA GVPVD  I +I R   +PN TE MEA+ A  QDVG
Sbjct: 313 WNPDVKVFPYDPDQAKKLLEEAKAGGVPVDNPITIIARTANFPNVTEIMEAVQAQLQDVG 372

Query: 370 LNVKLTMLDVNDWLRYLQKPFPESRGPNLLQMMHDNNKGDAAFTIPIFYTSAGSYSTFSD 429
             V+L  ++V +   Y  KPF E RGP ++  MHDN+KGD +FT+   Y + G+ S FSD
Sbjct: 373 FKVELRFVEVAEHEVYYSKPFKEGRGPQIVAAMHDNSKGDPSFTMFFKYDTNGTQSGFSD 432

Query: 430 AALDKEVADAMAATGEDRTAKFKAIFAKVHDDLAVDIPMFHMIGYTRVGSRLEWKPDITT 489
             +D  +  A AATG++R   +  + A VHDDL  D+ +FHM+GY+RV  RL++KP I T
Sbjct: 433 KNVDDLIKRASAATGDERAKLWSQLIAYVHDDLVADVLLFHMVGYSRVSERLDFKPTIAT 492

Query: 490 NSEIPLANIALK 501
           NS + L+ I  K
Sbjct: 493 NSMLQLSEIGFK 504