Pairwise Alignments

Query, 305 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  200 bits (509), Expect = 3e-56
 Identities = 110/265 (41%), Positives = 154/265 (58%), Gaps = 9/265 (3%)

Query: 31  AAVFLLVLIVCVLVGPLFVGELA----GKLGLRQRNLPPFALEHGFIYILGADTLGRPIL 86
           A VF LV++  +++  LF   LA        ++QR LPP     G  + LG D LGR +L
Sbjct: 36  AMVFGLVILAAMVLAALFAPWLAPFDPNAQNVQQRLLPP-----GAAHWLGTDQLGRDLL 90

Query: 87  ARLIVGAQNTLGIAAAAVFCSMALGGILGLAAGYSERWYSHVILRLADVVMSFPSLLLAL 146
           +R+I G + TL I +     S  LG +LG+ AGY   W   +++R+ D+ M+FP L+LAL
Sbjct: 91  SRVIYGTRPTLLIVSLVALLSAPLGLLLGMCAGYFGGWIDTLLMRVTDIFMAFPRLVLAL 150

Query: 147 IVLYTLGPSMTNLVIVLAITRMPIFIRTARAEVLELRERMFVSAARSMGASTGRILFRHI 206
            ++  LGP + N VI +AIT  P + R AR E   +R   F+ AAR  G    RILF H+
Sbjct: 151 ALVAVLGPGIVNAVIAIAITAWPAYARIARTETRTVRGSDFIQAARVQGLRPARILFGHL 210

Query: 207 APLVLPTLVTIAAIDFATVILAESSLSFLGLGIQPPDFTWGAMVANGRGYLKTAWWIAFW 266
            P+ LP+ V    +D A +IL  + L FLGLG QPP   WGAM++ GR Y+   WW+A  
Sbjct: 211 LPICLPSTVVRVTLDMAGIILTAAGLGFLGLGAQPPMSEWGAMISTGRQYIFDQWWVAAV 270

Query: 267 PGLAILLTTLSLNILASWARTVADP 291
           PG+AILL +L+ N++    R V DP
Sbjct: 271 PGVAILLGSLAFNLVGDGLRDVLDP 295