Pairwise Alignments

Query, 305 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  192 bits (488), Expect = 8e-54
 Identities = 101/270 (37%), Positives = 155/270 (57%), Gaps = 5/270 (1%)

Query: 23  TRDKLALCAAVFLLVLIVCVLVGPLFVGELAGKLGLRQ-RNLPPFALEHGFIYILGADTL 81
           + ++LAL   V ++ L+   L   +       +  LR  R LPP        Y+LG D  
Sbjct: 40  SENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPPGTAG----YLLGTDDQ 95

Query: 82  GRPILARLIVGAQNTLGIAAAAVFCSMALGGILGLAAGYSERWYSHVILRLADVVMSFPS 141
           GR IL+RLI G++ TL +       +  +G I+G  +GY+  W   +++R+ D+ ++FP 
Sbjct: 96  GRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIFLAFPK 155

Query: 142 LLLALIVLYTLGPSMTNLVIVLAITRMPIFIRTARAEVLELRERMFVSAARSMGASTGRI 201
           L+LAL ++  LGP + N V+ +A+T  P + R ARAE +  R   F++A + MGAS  RI
Sbjct: 156 LVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGASPFRI 215

Query: 202 LFRHIAPLVLPTLVTIAAIDFATVILAESSLSFLGLGIQPPDFTWGAMVANGRGYLKTAW 261
           + +H+ PL L +L+    +D A +IL  + L FLGLG QPP   WGAM+A+GR ++   W
Sbjct: 216 VLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRFILDQW 275

Query: 262 WIAFWPGLAILLTTLSLNILASWARTVADP 291
           W+A  PG+AIL+ +L  N+L    R   DP
Sbjct: 276 WVAAMPGIAILIVSLGFNLLGDGLRDALDP 305