Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  436 bits (1122), Expect = e-127
 Identities = 234/528 (44%), Positives = 350/528 (66%), Gaps = 7/528 (1%)

Query: 8   ILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPG 67
           ++ I  L+V+F++     R V++VSFD+  GET+ ++GESGSGKSV+  +++ L+  P  
Sbjct: 6   LIEIRDLSVEFVTGDHHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLPYPLA 65

Query: 68  DIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGE 127
              SG++ + G DL  L ++  R + G RIAMIFQ+P+  LNP++++ +QI EV   H  
Sbjct: 66  RHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHKG 125

Query: 128 GEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEPT 187
            +G     + + LL+ VGIPE  +R+   PH+ SGGQRQRVMIAMA+A +P++LIADEPT
Sbjct: 126 LQGKVATQRTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPT 185

Query: 188 TALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAEDV 247
           TALDV+VQ +ILELL++LQ   GMAL++I+HDL +   +A R+ VM  G +VE    E +
Sbjct: 186 TALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQADCETL 245

Query: 248 FTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGPFSPKREF-RA 306
           F +P H YT+ L++A P       P + A G  LL+V +L   + +  G      ++ +A
Sbjct: 246 FQSPQHPYTQELLAAEPSG----GPASNAIGPPLLEVDNLKVWFPIKKGFLRNTVDYVKA 301

Query: 307 VDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKALDGF 366
           VD ++F+L +G+T+GIVGESGSGKS++   +LRL   + G   F G+ +  L  + +   
Sbjct: 302 VDGINFSLPQGQTLGIVGESGSGKSTLGLAILRL-IASKGGIRFEGQQLDTLSQQQVRPL 360

Query: 367 RRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHAA 426
           RR +Q+VFQDPFGS++PRM V  I+ E   IH+   P E+    ++  L+ VGL  E   
Sbjct: 361 RREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTPAEQ-EAAIIAALKEVGLDPESRH 419

Query: 427 RHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYV 486
           R+PH+FSGGQRQRIAIARAL  +P LI+ DE  SALD ++Q QV+ELL  L+ +  L+Y+
Sbjct: 420 RYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYL 479

Query: 487 FITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRA 534
           FI+HDL +V+  + +++V++ G++VE+G+   +F +PQH YT+ LL A
Sbjct: 480 FISHDLAVVKALSHQLMVVKHGQVVEQGDAAEIFAAPQHGYTRQLLEA 527



 Score =  209 bits (532), Expect = 2e-58
 Identities = 115/264 (43%), Positives = 169/264 (64%), Gaps = 15/264 (5%)

Query: 281 LLQVAHLSKHYKLGSGPFSPKREFRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRL 340
           L+++  LS  +  G          R V++VSF ++RGET+ +VGESGSGKS  A  +LRL
Sbjct: 6   LIEIRDLSVEFVTGD------HHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRL 59

Query: 341 -----NEPTSGAALFAGEDIFELKGKALDGFR-RRVQMVFQDPFGSMNPRMNVRSIISEP 394
                    SG   +AG+D+  LK K +   R  R+ M+FQ+P  S+NP  ++   I+E 
Sbjct: 60  LPYPLARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEV 119

Query: 395 WAIHRDILPRERWNERVVELLELVGLKAEHAARH--PHQFSGGQRQRIAIARALASEPEL 452
             +H+ +  +    +R +ELL+LVG+   H      PH+ SGGQRQR+ IA ALA+EPEL
Sbjct: 120 LGLHKGLQGKVA-TQRTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPEL 178

Query: 453 IVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVE 512
           ++ DE  +ALDV++Q++++ELL +L+ RLG++ + I+HDL +VR+ A R+ VMQ+G IVE
Sbjct: 179 LIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVE 238

Query: 513 EGETEALFVSPQHEYTQALLRAVP 536
           + + E LF SPQH YTQ LL A P
Sbjct: 239 QADCETLFQSPQHPYTQELLAAEP 262