Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  438 bits (1126), Expect = e-127
 Identities = 238/531 (44%), Positives = 355/531 (66%), Gaps = 11/531 (2%)

Query: 8   ILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPG 67
           ++ I  L+V F  +      V ++S DV PGE L ++GESGSGKSV+  +++ L+    G
Sbjct: 3   LIEIRDLSVAFSGQ----TVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLP-EAG 57

Query: 68  DIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGE 127
              +GS+ + G +L        ++L G RIAMIFQ+P+  LNP++++ +QI E    H  
Sbjct: 58  TETTGSIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKG 117

Query: 128 GEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEPT 187
             G A + +++ LL+ VGI +  ER+  YPHQ SGGQRQRVMIAMA+A +P++LIADEPT
Sbjct: 118 LGGKAAQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPT 177

Query: 188 TALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAEDV 247
           TALDV+VQ +IL LL+ LQ+  GM+L++I+HDL +  ++A R+ VM  G++VE    + +
Sbjct: 178 TALDVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTL 237

Query: 248 FTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGPFSPKREFRAV 307
           F  P H Y+R L+ A P ADA      + + E +LQV  L+  ++LG G F  K   RAV
Sbjct: 238 FNAPQHPYSRLLLDAEPDADA----LCSDERETVLQVDDLTVQFRLGGGLFRRKTYLRAV 293

Query: 308 DDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKALDGFR 367
           D +S +++RG+T+GIVGESGSGKS++ + +LRL + T G+  F GE +  L  + +  +R
Sbjct: 294 DGISLSVQRGKTLGIVGESGSGKSTLGQAILRLLDST-GSIRFQGEALDPLNNQQMRPWR 352

Query: 368 RRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHAAR 427
           +++Q+VFQDP+GS++PRM V  IISE   +H      +R + +V+++L+ VGL      R
Sbjct: 353 KQMQVVFQDPYGSLSPRMTVEQIISEGLEVHAPCSLADR-DAQVIQVLKDVGLDPASRHR 411

Query: 428 HPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVF 487
           +PH+FSGGQRQRIAIARAL  +P L++ DE  SALD ++Q QV+ LL +L+ + GL+Y+F
Sbjct: 412 YPHEFSGGQRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGLTYLF 471

Query: 488 ITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVPQP 538
           I+HDL +VR  A  ++V++ G++VE G + A+F +PQH YT+ LL A   P
Sbjct: 472 ISHDLAVVRAMAHDMIVIKDGQVVERGASHAVFDAPQHPYTKELLAAAHIP 522



 Score =  183 bits (465), Expect = 1e-50
 Identities = 102/245 (41%), Positives = 153/245 (62%), Gaps = 8/245 (3%)

Query: 307 VDDVSFTLRRGETVGIVGESGSGKSSIARMLLRL----NEPTSGAALFAGEDIFELKGKA 362
           V ++S  +R GE + +VGESGSGKS  A  +L+L       T+G+  + G+++       
Sbjct: 19  VRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTETTGSIQYRGQELIGASAAT 78

Query: 363 LDGFR-RRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLK 421
           L   R  R+ M+FQ+P  S+NP  ++   I E   +H+  L  +    R++ELL+LVG++
Sbjct: 79  LQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKG-LGGKAAQARILELLDLVGIQ 137

Query: 422 A--EHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQ 479
              E    +PHQ SGGQRQR+ IA ALA EPEL++ DE  +ALDV++Q +++ LL  L++
Sbjct: 138 KPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRKILLLLKSLQK 197

Query: 480 RLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVPQPK 539
           RLG+S + I+HDL +VR  A R+ VM+ G IVE+ + + LF +PQH Y++ LL A P   
Sbjct: 198 RLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNAPQHPYSRLLLDAEPDAD 257

Query: 540 WLRSD 544
            L SD
Sbjct: 258 ALCSD 262