Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  397 bits (1020), Expect = e-115
 Identities = 212/529 (40%), Positives = 323/529 (61%), Gaps = 13/529 (2%)

Query: 8   ILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPG 67
           +L ++ L +  + E  P+ AVDD+SF + PGE + ++GESGSGK+++    +GL+  P  
Sbjct: 7   LLNVEHLKIR-VGEHGPL-AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPM- 63

Query: 68  DIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGE 127
            +  G L F G DL+ +  E  R + G  I M+FQ+P+  LNP   +G+Q++E  + H +
Sbjct: 64  QVCGGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTD 123

Query: 128 GEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEPT 187
            +   +R++ + +L R+GI  A+  ++ YPHQFSGG RQR+M+A  + L+P +LIADEPT
Sbjct: 124 LDPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPT 183

Query: 188 TALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAEDV 247
           TALD   Q  ++EL+ +L RE G A++ I+HDL + A  A +++VM  GK VE G  ED+
Sbjct: 184 TALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDI 243

Query: 248 FTNPSHAYTRRLMSAVPHAD--APKAPRNAAQGEVLLQVAHLSKHYKLGSGPFSPKREFR 305
              P   YTR+L+ A+P     AP    N    E L++V  +   +   +  +  ++  R
Sbjct: 244 LLAPKAEYTRQLLEALPRRGVLAPLPVSN----EPLVEVDQVCIEHPGPTTFWGKRQHTR 299

Query: 306 AVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKALDG 365
            V   S  +  GET+ +VG SGSGK+++ R L+ L +P +G+  F G DI +   +    
Sbjct: 300 VVHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVDILKAANRT--- 356

Query: 366 FRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHA 425
            R + QM+FQDP+ S+NPRM +  I++EP      +   ER  ERV + L+ +GL  +  
Sbjct: 357 HRLQCQMIFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAER-RERVTQTLKDIGLGEQFV 415

Query: 426 ARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSY 485
            R PHQ SGGQRQR+AI RAL   P+L++ DE +SALD++IQ Q++EL   L+ + G + 
Sbjct: 416 ERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQYGFAC 475

Query: 486 VFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRA 534
           +FI+HDL  V + A R+ VM +G +VE G  E +F  PQH YT+ LL A
Sbjct: 476 LFISHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLLAA 524



 Score =  175 bits (444), Expect = 4e-48
 Identities = 106/265 (40%), Positives = 157/265 (59%), Gaps = 16/265 (6%)

Query: 280 VLLQVAHLSKHYKLGSGPFSPKREFRAVDDVSFTLRRGETVGIVGESGSGKSSIARM--- 336
           VLL V HL    K+  G   P     AVDD+SF++  GE V +VGESGSGK+  AR    
Sbjct: 6   VLLNVEHL----KIRVGEHGPL----AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIG 57

Query: 337 LLRLNEPTSGAAL-FAGEDIFELKGKALDGFR-RRVQMVFQDPFGSMNPRMNVRSIISEP 394
           LL L     G  L F G D+  +  +AL   R   + MVFQ+P  S+NP + +   +SE 
Sbjct: 58  LLPLPMQVCGGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEA 117

Query: 395 WAIHRDILPRERWNERVVELLELVGLKAEHAA--RHPHQFSGGQRQRIAIARALASEPEL 452
             +H D+ P +   ER + +L  +G+KA       +PHQFSGG RQRI +A  +   P L
Sbjct: 118 LKLHTDLDPPQI-RERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPAL 176

Query: 453 IVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVE 512
           ++ DE  +ALD   Q+ VIEL+ +L +  G + +FI+HDL +V ++A +++VM+ G+ VE
Sbjct: 177 LIADEPTTALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVE 236

Query: 513 EGETEALFVSPQHEYTQALLRAVPQ 537
           +G  E + ++P+ EYT+ LL A+P+
Sbjct: 237 QGSIEDILLAPKAEYTRQLLEALPR 261