Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  474 bits (1219), Expect = e-138
 Identities = 272/573 (47%), Positives = 351/573 (61%), Gaps = 46/573 (8%)

Query: 1   MNAPDKPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMG 60
           + A   P+L +  L V FL    PV+AV  +   +  GETL ++GESG GKS +   ++ 
Sbjct: 6   VQAKAPPLLDVRGLDVFFLGSNGPVQAVRGLDLTLQRGETLALVGESGCGKSTTALALLR 65

Query: 61  LIDCPPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAE 120
           L+   PG ++ GS+ FDG D+  L     RE+ GR I+MIFQ+P+  LNPV+T+G QI E
Sbjct: 66  LL--APGAVLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEE 123

Query: 121 VFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDI 180
               H +    A R + + LL+ V IPE  +RID +PH  SGGQRQRVMIAMA+A KP +
Sbjct: 124 TLRRHEKLSALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRL 183

Query: 181 LIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVE 240
           L+ADEPTTALDV++QAQILELL  L+RE  MAL++ITHDL + A  ADR+ VM GG+ VE
Sbjct: 184 LVADEPTTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVE 243

Query: 241 SGKAEDVFTNPSHAYTRRLMSAVPHA------------------DAPKAPRN-------- 274
                 +F  PSHAYTR L+ A  HA                  DA    R+        
Sbjct: 244 EASTSRLFAAPSHAYTRGLLGASLHAGSALHYVDARLPEIQTRLDAATGERSFALHVPEP 303

Query: 275 ----------AAQGEVLLQVAHLSKHY-KLGSGPFSPKREFRAVDDVSFTLRRGETVGIV 323
                      A  E LL V  L   Y K G G         AVD VSF +R GETVG+V
Sbjct: 304 NSKVRALPVRTAAAEPLLSVQDLRTDYPKRGGGVL------HAVDGVSFDIRAGETVGLV 357

Query: 324 GESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKALDGFRRRVQMVFQDPFGSMNP 383
           GESG GKS+++R LLRL  P SG  +F G DI +L  KAL  +RRRVQMVFQDP+ S+NP
Sbjct: 358 GESGCGKSTLSRTLLRLVNPASGRIVFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNP 417

Query: 384 RMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIA 443
           R +V  II     +H  +  R     R+  +LE VGL A+   R P++FSGGQRQRI IA
Sbjct: 418 RRSVFDIIESVLKVH-GVADRAERRNRIAAILERVGLPADAGRRFPNEFSGGQRQRIGIA 476

Query: 444 RALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRIL 503
           RAL   P L+V DE VSALDVS+Q Q++ LL +L++  GLSY+FI+HDL +VR  ADR++
Sbjct: 477 RALVLRPSLVVLDEPVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVM 536

Query: 504 VMQRGRIVEEGETEALFVSPQHEYTQALLRAVP 536
           VM +G+IVE G    ++  PQH YT++L+ AVP
Sbjct: 537 VMSKGQIVETGSHRDIWDRPQHPYTRSLIAAVP 569



 Score =  218 bits (554), Expect = 7e-61
 Identities = 119/271 (43%), Positives = 179/271 (66%), Gaps = 11/271 (4%)

Query: 3   APDKPILRIDKLTVDFLSEGDPV-RAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGL 61
           A  +P+L +  L  D+   G  V  AVD VSFD+  GET+ ++GESG GKS  + T++ L
Sbjct: 315 AAAEPLLSVQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRL 374

Query: 62  IDCPPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEV 121
           ++       SG +VFDGTD+++L ++  +    RR+ M+FQDP A LNP  +V   I  V
Sbjct: 375 VNP-----ASGRIVFDGTDIAQLSEKALKPWR-RRVQMVFQDPYASLNPRRSVFDIIESV 428

Query: 122 FESHGEGEGGAVRDKVVRLLERVGIP-EADERIDYYPHQFSGGQRQRVMIAMAIALKPDI 180
            + HG  +    R+++  +LERVG+P +A  R   +P++FSGGQRQR+ IA A+ L+P +
Sbjct: 429 LKVHGVADRAERRNRIAAILERVGLPADAGRR---FPNEFSGGQRQRIGIARALVLRPSL 485

Query: 181 LIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVE 240
           ++ DEP +ALDVSVQAQIL LL +L+ + G++ + I+HDL V   +ADR++VM+ G++VE
Sbjct: 486 VVLDEPVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVE 545

Query: 241 SGKAEDVFTNPSHAYTRRLMSAVPHADAPKA 271
           +G   D++  P H YTR L++AVP A+  KA
Sbjct: 546 TGSHRDIWDRPQHPYTRSLIAAVPGAEQRKA 576