Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  403 bits (1036), Expect = e-117
 Identities = 221/531 (41%), Positives = 332/531 (62%), Gaps = 11/531 (2%)

Query: 8   ILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPG 67
           +L++  LT   L+  D    V  +SFD+ PGE + I+GESGSGK+++  +++GL   P  
Sbjct: 9   LLQVSGLT---LALADGKALVHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAP-PAV 64

Query: 68  DIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGE 127
              +GS+VFDG +++ L     R+L G RI M+FQ+P+  LNP   +GRQ+ E    H  
Sbjct: 65  HRTAGSIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTT 124

Query: 128 GEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEPT 187
                 R +++ +LERV I +    +  YPH+FSGG RQR+M+A A+ L+P +LIADEPT
Sbjct: 125 LSPAQRRARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPT 184

Query: 188 TALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAEDV 247
           TALD  VQ ++++L+ +L R+ G A++MI+HDL + A   DR++VM+ G++VES +   +
Sbjct: 185 TALDAVVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAAL 244

Query: 248 FTNPSHAYTRRLMSAVPHADAPKAP-RNAAQGEVLLQVAHLSKHYKLGSGPFSPKREFRA 306
            + P   YTR+L++A+P     + P R   Q   +L+V  L   +  G G  S +   RA
Sbjct: 245 VSAPREDYTRKLLAAMP----TRGPVREIPQAAPILEVDGLVLDFPAGGGLLSKRPPKRA 300

Query: 307 VDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKALDGF 366
           +  +   +  GE V +VG SGSGK+++ R +  L +P+ G  LF G+ I   + +    +
Sbjct: 301 LKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAGLLQPSGGRILFEGKGIAR-RSEGWARY 359

Query: 367 RRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHAA 426
           R + QMVFQDP  S++PRM V + I E       + P  R   R++E+L+ V L AE A+
Sbjct: 360 RAQCQMVFQDPASSLDPRMTVGASIGEALTGMPGLTPAAR-RGRILEVLQEVSLPAEVAS 418

Query: 427 RHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYV 486
           R+PH+ SGGQRQR+AIARA+   P  IV DE VSALDV+++ Q++EL A L+ R G S +
Sbjct: 419 RYPHELSGGQRQRVAIARAVVRRPAFIVADEPVSALDVTVRAQILELFAQLQSRHGFSCL 478

Query: 487 FITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVPQ 537
           FI+HDL +V Q ADR++VM+ G IVE+G  + +F  P H+YT+ LL A P+
Sbjct: 479 FISHDLAVVEQIADRVIVMRHGEIVEQGPRDEVFDRPHHDYTRELLAAAPR 529



 Score =  186 bits (472), Expect = 2e-51
 Identities = 106/264 (40%), Positives = 153/264 (57%), Gaps = 15/264 (5%)

Query: 7   PILRIDKLTVDF------LSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMG 60
           PIL +D L +DF      LS+  P RA+  +   + PGE + ++G SGSGK+     + G
Sbjct: 274 PILEVDGLVLDFPAGGGLLSKRPPKRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAG 333

Query: 61  LIDCPPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAE 120
           L+  P G    G ++F+G  ++R  +   R     +  M+FQDP + L+P  TVG  I E
Sbjct: 334 LLQ-PSG----GRILFEGKGIARRSEGWAR--YRAQCQMVFQDPASSLDPRMTVGASIGE 386

Query: 121 VFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDI 180
                      A R +++ +L+ V +P   E    YPH+ SGGQRQRV IA A+  +P  
Sbjct: 387 ALTGMPGLTPAARRGRILEVLQEVSLPA--EVASRYPHELSGGQRQRVAIARAVVRRPAF 444

Query: 181 LIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVE 240
           ++ADEP +ALDV+V+AQILEL   LQ   G + + I+HDL V   +ADR+IVM  G++VE
Sbjct: 445 IVADEPVSALDVTVRAQILELFAQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEIVE 504

Query: 241 SGKAEDVFTNPSHAYTRRLMSAVP 264
            G  ++VF  P H YTR L++A P
Sbjct: 505 QGPRDEVFDRPHHDYTRELLAAAP 528



 Score =  181 bits (459), Expect = 6e-50
 Identities = 104/251 (41%), Positives = 156/251 (62%), Gaps = 10/251 (3%)

Query: 307 VDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEP----TSGAALFAGEDIFELKGKA 362
           V  +SF +  GE +GIVGESGSGK+  AR L+ L  P    T+G+ +F G+++  L   A
Sbjct: 26  VHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPPAVHRTAGSIVFDGQEVTALSAGA 85

Query: 363 LDGFR-RRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLK 421
           L   R  R+ MVFQ+P  S+NP M +   + E  A+H  + P +R   R++E+LE V ++
Sbjct: 86  LRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTTLSPAQR-RARILEMLERVRIQ 144

Query: 422 AEHAA--RHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQ 479
              AA   +PH+FSGG RQRI +A A+   P L++ DE  +ALD  +Q +V++L+ +L +
Sbjct: 145 DPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPTTALDAVVQREVMDLMVELTR 204

Query: 480 RLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVPQPK 539
             G + + I+HDLP+V ++ DR++VM  GRIVE   T AL  +P+ +YT+ LL A+P   
Sbjct: 205 DHGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAALVSAPREDYTRKLLAAMPTRG 264

Query: 540 WLRSDP--API 548
            +R  P  API
Sbjct: 265 PVREIPQAAPI 275