Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  478 bits (1231), Expect = e-139
 Identities = 262/556 (47%), Positives = 363/556 (65%), Gaps = 27/556 (4%)

Query: 6   KPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCP 65
           +P+L +  L   F ++G     V  VSFD+   ET+ ++GESGSGKSV+  ++M L + P
Sbjct: 25  QPVLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVAVVGESGSGKSVTALSIMRL-NSP 83

Query: 66  PGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESH 125
            G  + GS+   G +L  L D   R++ G  IAMIFQ+P+  LNPV T+G QIAE    H
Sbjct: 84  RGTKIEGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILH 143

Query: 126 GEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADE 185
                    ++ +RLLE+V IP A  R   YPH+FSGG RQRVMIAMA+A KP +LIADE
Sbjct: 144 RGLSRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADE 203

Query: 186 PTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAE 245
           PTTALDV++QAQILEL+++LQ+E GM+++ ITHD+ V A +ADR +VM  G+ VE+   +
Sbjct: 204 PTTALDVTIQAQILELIKELQQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTD 263

Query: 246 DVFTNPSHAYTRRLMSAVPHADA----------PKAPRNAAQGEV--------------L 281
           D+F  P+H YTR L+SAVP   +          P   R+  + +V              +
Sbjct: 264 DIFNRPNHPYTRSLLSAVPKLGSMAGRSRPMRFPVVDRSTGEADVPVEVPDTVKVSERPV 323

Query: 282 LQVAHLSKHYKLGSGPFSP-KREFRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRL 340
           L+VA L+K +++ SG FS  K    AV++VSF+++ GET+ +VGESG GKS+  R ++RL
Sbjct: 324 LEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMRL 383

Query: 341 NEPTSGAALFAGEDIFELKGKALDGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRD 400
            EP+ G  L  G D+ +L    L   R  +QM+FQDP+ S+NPRMN+ + I+EP  I+  
Sbjct: 384 VEPSGGLVLLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLLINGK 443

Query: 401 ILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVS 460
              +    ++V ELL+ VGL  + A R PH+FSGGQRQRI IARALA EP+LIV DEAVS
Sbjct: 444 -GGQSEVADKVAELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVS 502

Query: 461 ALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALF 520
           ALDVS++ QV+ L+ DL+ R+GL+Y+FI+HD+ +V + + R+ VM  G IVE G  EA+F
Sbjct: 503 ALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIF 562

Query: 521 VSPQHEYTQALLRAVP 536
            +PQH YT+ LL AVP
Sbjct: 563 QNPQHPYTRRLLSAVP 578



 Score =  206 bits (525), Expect = 2e-57
 Identities = 120/272 (44%), Positives = 175/272 (64%), Gaps = 19/272 (6%)

Query: 5   DKPILRIDKLTVDFLSEGDP-------VRAVDDVSFDVCPGETLVILGESGSGKSVSTGT 57
           ++P+L +  LT  F  +          V AV++VSF +  GETL ++GESG GKS +  +
Sbjct: 320 ERPVLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRS 379

Query: 58  VMGLIDCPPGDIVSGSLVFDGTDLSRLD-DEGRRELNGRRIAMIFQDPLAYLNPVYTVGR 116
           VM L++ P G +V    + DG D+ +L  +E R + N   + MIFQDP A LNP   +G 
Sbjct: 380 VMRLVE-PSGGLV----LLDGVDVLKLSQNELRHQRN--HMQMIFQDPYASLNPRMNIGT 432

Query: 117 QIAEVFESHGEGEGGAVRDKVVRLLERVGI-PEADERIDYYPHQFSGGQRQRVMIAMAIA 175
            IAE    +G+G    V DKV  LL++VG+ P+  +R   +PH+FSGGQRQR+ IA A+A
Sbjct: 433 AIAEPLLINGKGGQSEVADKVAELLQKVGLSPDMAKR---FPHEFSGGQRQRICIARALA 489

Query: 176 LKPDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNG 235
           L+P +++ADE  +ALDVSV++Q++ L+ DLQ   G+A + I+HD+ V   ++ R+ VM  
Sbjct: 490 LEPKLIVADEAVSALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYL 549

Query: 236 GKVVESGKAEDVFTNPSHAYTRRLMSAVPHAD 267
           G++VE+G  E +F NP H YTRRL+SAVP AD
Sbjct: 550 GEIVEAGSREAIFQNPQHPYTRRLLSAVPIAD 581



 Score =  181 bits (460), Expect = 6e-50
 Identities = 100/238 (42%), Positives = 148/238 (62%), Gaps = 8/238 (3%)

Query: 307 VDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTS----GAALFAGEDIFELKGKA 362
           V  VSF +   ETV +VGESGSGKS  A  ++RLN P      G+    G+++  L    
Sbjct: 47  VQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGTKIEGSVKLGGKELLSLSDAE 106

Query: 363 LDGFRRR-VQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLK 421
           +   R   + M+FQ+P  S+NP + +   I+E   +HR +   +  NE  + LLE V + 
Sbjct: 107 MRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRGLSRAQAENE-TIRLLEKVRIP 165

Query: 422 AEHAARH--PHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQ 479
           A  +  H  PH+FSGG RQR+ IA ALA +P+L++ DE  +ALDV+IQ Q++EL+ +L+Q
Sbjct: 166 AAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPTTALDVTIQAQILELIKELQQ 225

Query: 480 RLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVPQ 537
             G+S +FITHD+ +V + ADR +VM +G+ VE   T+ +F  P H YT++LL AVP+
Sbjct: 226 EDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDIFNRPNHPYTRSLLSAVPK 283