Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  458 bits (1178), Expect = e-133
 Identities = 253/532 (47%), Positives = 343/532 (64%), Gaps = 5/532 (0%)

Query: 5   DKPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDC 64
           ++P++   K+ V F  E   V+AV DVSF +  GET+ I+GESGSGKSV+  TVMGL+  
Sbjct: 22  ERPVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSK 81

Query: 65  PPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFES 124
                    + +DG D+ +     RR L G RI+MIFQ+P++ LNPVYT+G QI E   +
Sbjct: 82  RATIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRA 141

Query: 125 HGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIAD 184
           H      A  ++ + LL  V IP+ + R++ YPHQ SGGQRQRVMIAMA+A  PD+LIAD
Sbjct: 142 HRRVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIAD 201

Query: 185 EPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKA 244
           EPTTALDV+VQAQIL L+R LQ+E GMA+I+ITHDL V    +D + VM  G+V E    
Sbjct: 202 EPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTT 261

Query: 245 EDVFTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGP-FSPK-R 302
           E +F +P HAYTRRL+S+ P   A   P +A    +LL   ++   + L  G  F P+ +
Sbjct: 262 EALFADPQHAYTRRLLSSEPSGSANPLPDDA---PILLDGRNVRVSFTLKKGGFFRPEFK 318

Query: 303 EFRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKA 362
           E  AVD +S  LRR ET+G+VGESGSGK++  + L+RL     G   F GE I +   K 
Sbjct: 319 ELVAVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKG 378

Query: 363 LDGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKA 422
           +   R ++Q+VFQDPF S+NPRM+V  II E   ++     R+   +RV + L   G+ +
Sbjct: 379 MRPLRSKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPS 438

Query: 423 EHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLG 482
              +R PH+FSGGQRQRIAIARA+A EPE I+ DE  SALD+S+Q Q+IELL  L+   G
Sbjct: 439 NILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERG 498

Query: 483 LSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRA 534
           LSY+ I+HDL +VR    R++VMQ G+IVEEG    +  +P+  YT+ L++A
Sbjct: 499 LSYLVISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKA 550



 Score =  189 bits (479), Expect = 3e-52
 Identities = 108/240 (45%), Positives = 148/240 (61%), Gaps = 9/240 (3%)

Query: 305 RAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFA-----GEDIFELK 359
           +AV DVSF L RGETV IVGESGSGKS  AR ++ L    +  A  A     G D+ +  
Sbjct: 43  QAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRATIAPQARIEYDGRDVLKFS 102

Query: 360 GKALDGFRR-RVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELV 418
            +     R  R+ M+FQ+P  S+NP   + S I E    HR +  R    ER +ELL  V
Sbjct: 103 KRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRRV-SRRAAAERALELLRHV 161

Query: 419 GLKAEHAA--RHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLAD 476
            +    A   ++PHQ SGGQRQR+ IA ALA++P++++ DE  +ALDV++Q Q++ L+  
Sbjct: 162 QIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRK 221

Query: 477 LRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVP 536
           L+Q LG++ + ITHDL +VRQF+D + VMQ G + E   TEALF  PQH YT+ LL + P
Sbjct: 222 LQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEALFADPQHAYTRRLLSSEP 281