Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  437 bits (1124), Expect = e-127
 Identities = 236/531 (44%), Positives = 351/531 (66%), Gaps = 7/531 (1%)

Query: 5   DKPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDC 64
           ++ ++ +  L V+F++     R VD VSFD+  GETL ++GESGSGKSV+  +++ L+  
Sbjct: 3   EQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPY 62

Query: 65  PPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFES 124
           P     SGS+ ++G DL +  ++  + + G RIAMIFQ+P+  LNP++ + +QI E+   
Sbjct: 63  PLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLL 122

Query: 125 HGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIAD 184
           H    G     + + LL+ VGIPE  +R+   PH+ SGGQRQRVMIAMA+A +P++LIAD
Sbjct: 123 HKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIAD 182

Query: 185 EPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKA 244
           EPTTALDV+VQ +ILELL++LQ   GMAL++I+HDL +   +A R+ VM  G++VE  + 
Sbjct: 183 EPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAEC 242

Query: 245 EDVFTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGPFSPKRE- 303
             +F++P H YT+ L++A P       P +   G  LL+V  L   + +  G      + 
Sbjct: 243 ATLFSSPQHHYTQMLINAEPSG----LPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDH 298

Query: 304 FRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKAL 363
            +AVD V+F+L +G+T+GIVGESGSGKS++   +LRL   + G   F G+++  L  KA+
Sbjct: 299 VKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLIS-SQGGIRFHGQNLEGLNQKAV 357

Query: 364 DGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAE 423
              RR +Q+VFQDPFGS++PRM V  I+ E   IHR I   +     ++  LE VGL   
Sbjct: 358 RPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHR-IGTAQEQEAAIIAALEEVGLDPR 416

Query: 424 HAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGL 483
              R+PH+FSGGQRQRIAIARAL  +P LI+ DE  SALD ++Q QV+ELL +L+Q+  L
Sbjct: 417 TRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNL 476

Query: 484 SYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRA 534
           +Y+FI+HDL +V+  + +++V++ G +VE+G+ +A+F +PQH YT+ LL A
Sbjct: 477 TYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527



 Score =  202 bits (514), Expect = 3e-56
 Identities = 108/240 (45%), Positives = 158/240 (65%), Gaps = 9/240 (3%)

Query: 305 RAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRL-----NEPTSGAALFAGEDIFELK 359
           R VD VSF +R+GET+ +VGESGSGKS  A  +LRL         SG+  + G+D+ +  
Sbjct: 24  RVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLLQQS 83

Query: 360 GKALDGFR-RRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELV 418
            K L   R  R+ M+FQ+P  S+NP   +   I+E   +H+ +  +E    R +ELL++V
Sbjct: 84  EKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEA-TARTLELLDMV 142

Query: 419 GLKA--EHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLAD 476
           G+    +     PH+ SGGQRQR+ IA ALA+EPEL++ DE  +ALDV++Q++++ELL +
Sbjct: 143 GIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKE 202

Query: 477 LRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVP 536
           L+ R+G++ + I+HDL +VR+ A R+ VMQRG+IVE+ E   LF SPQH YTQ L+ A P
Sbjct: 203 LQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATLFSSPQHHYTQMLINAEP 262