Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 629 a.a., dipeptide ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  457 bits (1177), Expect = e-133
 Identities = 264/566 (46%), Positives = 354/566 (62%), Gaps = 32/566 (5%)

Query: 2   NAPDKPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGL 61
           N P + ++ ID +TV F        AV D+S  V  GETL I+GESGSGKSV++  +M L
Sbjct: 13  NLPPQRVVDIDSMTVAFRRGETTFNAVRDLSLTVDRGETLAIVGESGSGKSVTSLALMRL 72

Query: 62  IDCPPGDIVSGSLVF---DGT--DLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGR 116
           ++   G I +GS+ F   +G+  DL +      R + G  IAMIFQ+P+  LNPV+TVG 
Sbjct: 73  VEHGGGKIANGSIAFRRRNGSVLDLVQASQATMRSVRGADIAMIFQEPMTSLNPVFTVGD 132

Query: 117 QIAEVFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIAL 176
           QI E    H          + +RLL+ V IPEA      YPHQ SGG RQRVMIAMA++ 
Sbjct: 133 QIGEAIALHQNKSRSEAHAETLRLLDLVRIPEARRVAARYPHQLSGGMRQRVMIAMALSC 192

Query: 177 KPDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGG 236
           KP +LIADEPTTALDV++QAQIL+L+R LQ E  M +I ITHD+ V A +ADR++VM  G
Sbjct: 193 KPSLLIADEPTTALDVTIQAQILQLIRGLQDEMNMGVIFITHDMGVVAEVADRVLVMYRG 252

Query: 237 KVVESGKAEDVFTNPSHAYTRRLMSAVPH------ADAP--------------KAPRNAA 276
             VE G++  +F  P+H YT+ L++AVP        DAP               AP   A
Sbjct: 253 DKVEEGESAQLFAAPAHPYTKALLAAVPKLGSMQGTDAPAKFSLLTLDGEQAKAAPEAQA 312

Query: 277 Q-----GEVLLQVAHLSKHYKLGSGPFSP-KREFRAVDDVSFTLRRGETVGIVGESGSGK 330
           Q      + +L+V  L   + + SG FS       AV+ VSF L  GET+ +VGESG GK
Sbjct: 313 QTQTQAAQPVLRVRDLVTRFPVRSGLFSKLTGRVHAVERVSFDLHAGETLALVGESGCGK 372

Query: 331 SSIARMLLRLNEPTSGAALFAGEDIFELKGKALDGFRRRVQMVFQDPFGSMNPRMNVRSI 390
           S+  R LLRL E  SG+  F G+DI  L G +L   RR +Q +FQDPF S+NPR+ V   
Sbjct: 373 STTGRSLLRLVESQSGSIEFDGKDISSLSGPSLQALRRDIQFIFQDPFASLNPRLTVGFS 432

Query: 391 ISEPWAIHRDILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIARALASEP 450
           I EP  +H ++   +    RV  LL+ VGL A+ A R+PH+FSGGQRQRIAIARALA  P
Sbjct: 433 IMEPLLVH-NVASGKEAQARVAWLLDKVGLPADAARRYPHEFSGGQRQRIAIARALALNP 491

Query: 451 ELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRI 510
           ++++ DE+VSALDVS+Q Q++ L+ DL++ LG++Y+FI+HD+ +V + + R+ VM  G+I
Sbjct: 492 KVVIADESVSALDVSVQAQIVNLMLDLQRELGVAYLFISHDMAVVERISHRVAVMYLGQI 551

Query: 511 VEEGETEALFVSPQHEYTQALLRAVP 536
           VE G   A+F SPQH YT+ L+ AVP
Sbjct: 552 VEIGPRRAVFESPQHPYTKKLMGAVP 577



 Score =  207 bits (527), Expect = 1e-57
 Identities = 122/269 (45%), Positives = 163/269 (60%), Gaps = 15/269 (5%)

Query: 6   KPILRIDKLTVDFLSEGD-------PVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTV 58
           +P+LR+  L   F             V AV+ VSFD+  GETL ++GESG GKS +  ++
Sbjct: 320 QPVLRVRDLVTRFPVRSGLFSKLTGRVHAVERVSFDLHAGETLALVGESGCGKSTTGRSL 379

Query: 59  MGLIDCPPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQI 118
           + L++       SGS+ FDG D+S L     + L  R I  IFQDP A LNP  TVG  I
Sbjct: 380 LRLVESQ-----SGSIEFDGKDISSLSGPSLQALR-RDIQFIFQDPFASLNPRLTVGFSI 433

Query: 119 AEVFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKP 178
            E    H    G   + +V  LL++VG+P    R   YPH+FSGGQRQR+ IA A+AL P
Sbjct: 434 MEPLLVHNVASGKEAQARVAWLLDKVGLPADAAR--RYPHEFSGGQRQRIAIARALALNP 491

Query: 179 DILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKV 238
            ++IADE  +ALDVSVQAQI+ L+ DLQRE G+A + I+HD+ V   ++ R+ VM  G++
Sbjct: 492 KVVIADESVSALDVSVQAQIVNLMLDLQRELGVAYLFISHDMAVVERISHRVAVMYLGQI 551

Query: 239 VESGKAEDVFTNPSHAYTRRLMSAVPHAD 267
           VE G    VF +P H YT++LM AVP AD
Sbjct: 552 VEIGPRRAVFESPQHPYTKKLMGAVPVAD 580



 Score =  184 bits (466), Expect = 1e-50
 Identities = 107/257 (41%), Positives = 150/257 (58%), Gaps = 14/257 (5%)

Query: 304 FRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKAL 363
           F AV D+S T+ RGET+ IVGESGSGKS  +  L+RL E   G             G  L
Sbjct: 36  FNAVRDLSLTVDRGETLAIVGESGSGKSVTSLALMRLVEHGGGKIANGSIAFRRRNGSVL 95

Query: 364 DGFRRR-----------VQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVV 412
           D  +             + M+FQ+P  S+NP   V   I E  A+H++   R   +   +
Sbjct: 96  DLVQASQATMRSVRGADIAMIFQEPMTSLNPVFTVGDQIGEAIALHQN-KSRSEAHAETL 154

Query: 413 ELLELVGLKAEH--AARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQV 470
            LL+LV +      AAR+PHQ SGG RQR+ IA AL+ +P L++ DE  +ALDV+IQ Q+
Sbjct: 155 RLLDLVRIPEARRVAARYPHQLSGGMRQRVMIAMALSCKPSLLIADEPTTALDVTIQAQI 214

Query: 471 IELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQA 530
           ++L+  L+  + +  +FITHD+ +V + ADR+LVM RG  VEEGE+  LF +P H YT+A
Sbjct: 215 LQLIRGLQDEMNMGVIFITHDMGVVAEVADRVLVMYRGDKVEEGESAQLFAAPAHPYTKA 274

Query: 531 LLRAVPQPKWLRSDPAP 547
           LL AVP+   ++   AP
Sbjct: 275 LLAAVPKLGSMQGTDAP 291