Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 623 a.a., ABC transporter ATP-binding protein from Pectobacterium carotovorum WPP14

 Score =  454 bits (1167), Expect = e-132
 Identities = 257/562 (45%), Positives = 356/562 (63%), Gaps = 29/562 (5%)

Query: 2   NAPDKPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGL 61
           NAP +P+L ID L+V F       +A+  +SF V  GE + ++GESGSGKSV++  VMGL
Sbjct: 15  NAP-RPVLEIDDLSVSFSGRSGTHQALKGISFTVNKGEVVAVVGESGSGKSVTSLAVMGL 73

Query: 62  IDCPPGDIVSGSLVF---DGT--DLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGR 116
           +     +I  G+L F   DG   DL  +  E RR+L GR +AMIFQ+P+  LNPV  VG 
Sbjct: 74  L-ADSANIERGALRFTARDGKQHDLLSMKAEARRKLRGRDLAMIFQEPMTSLNPVLKVGD 132

Query: 117 QIAEVFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIAL 176
           Q+ E    H   +  +   K   LL +V I + D  +  YPH  SGG RQRVMIA A+A 
Sbjct: 133 QLTEALLDHKICDAASADKKARELLHKVRIADVDRVMKSYPHSLSGGMRQRVMIAQALAC 192

Query: 177 KPDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGG 236
            P +LIADEPTTALDV+VQA+IL++LRDLQ+++ M+++ ITHD+ V A +ADR++VM  G
Sbjct: 193 DPQLLIADEPTTALDVTVQARILQILRDLQQQSDMSVLFITHDMGVVAEIADRVVVMYRG 252

Query: 237 KVVESGKAEDVFTNPSHAYTRRLMSAVPHADA------PKA---------PRNAAQ---- 277
           ++VE G  E +F  P H YT+ L++AVP          PK          P N+ Q    
Sbjct: 253 EIVEQGTVEQIFAAPQHPYTQSLLAAVPKLGDMRDSLWPKRFPLLGQAADPENSEQVTAR 312

Query: 278 --GEVLLQVAHLSKHYKLGSGPFSP-KREFRAVDDVSFTLRRGETVGIVGESGSGKSSIA 334
              E LL +  LS +Y + SG  S       AV+ + F +  GET+ IVGESG GKS+  
Sbjct: 313 YDAEPLLDIRGLSVYYPMRSGILSTITHHVHAVEQIDFNVWPGETLAIVGESGCGKSTTG 372

Query: 335 RMLLRLNEPTSGAALFAGEDIFELKGKALDGFRRRVQMVFQDPFGSMNPRMNVRSIISEP 394
           R LLRL +  + +  F G +I ++K +     RR +QMVFQDP+ S+NPR+ V   I+EP
Sbjct: 373 RALLRLVQSQAESIHFQGNEISQMKERDFQPLRREMQMVFQDPYASLNPRLTVGFTIAEP 432

Query: 395 WAIHRDILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIARALASEPELIV 454
             +H  +   E    +V  LL+ VGL  EHA R+PH+FSGGQRQRIAIARA+A +P++I+
Sbjct: 433 LLLHGLVKSLEEATPQVQALLKSVGLLPEHARRYPHEFSGGQRQRIAIARAMALQPQVII 492

Query: 455 CDEAVSALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEG 514
            DEAVSALDVSIQ QV+ L+ DL+++ G+S++FI+HD+ +V + A+R+ VM  G+IVE G
Sbjct: 493 ADEAVSALDVSIQAQVVNLMMDLQKKTGVSWIFISHDMAVVERIANRVAVMYLGQIVEIG 552

Query: 515 ETEALFVSPQHEYTQALLRAVP 536
             +++F  PQH YT+ LL +VP
Sbjct: 553 PRQSVFNDPQHPYTRRLLASVP 574



 Score =  196 bits (498), Expect = 2e-54
 Identities = 111/245 (45%), Positives = 160/245 (65%), Gaps = 11/245 (4%)

Query: 25  VRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPGDIVSGSLVFDGTDLSRL 84
           V AV+ + F+V PGETL I+GESG GKS +   ++ L+        + S+ F G ++S++
Sbjct: 342 VHAVEQIDFNVWPGETLAIVGESGCGKSTTGRALLRLVQSQ-----AESIHFQGNEISQM 396

Query: 85  DDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGEGEG-GAVRDKVVRLLER 143
            +   + L  R + M+FQDP A LNP  TVG  IAE    HG  +       +V  LL+ 
Sbjct: 397 KERDFQPLR-REMQMVFQDPYASLNPRLTVGFTIAEPLLLHGLVKSLEEATPQVQALLKS 455

Query: 144 VGI-PEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEPTTALDVSVQAQILELL 202
           VG+ PE   R   YPH+FSGGQRQR+ IA A+AL+P ++IADE  +ALDVS+QAQ++ L+
Sbjct: 456 VGLLPEHARR---YPHEFSGGQRQRIAIARAMALQPQVIIADEAVSALDVSIQAQVVNLM 512

Query: 203 RDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAEDVFTNPSHAYTRRLMSA 262
            DLQ++TG++ I I+HD+ V   +A+R+ VM  G++VE G  + VF +P H YTRRL+++
Sbjct: 513 MDLQKKTGVSWIFISHDMAVVERIANRVAVMYLGQIVEIGPRQSVFNDPQHPYTRRLLAS 572

Query: 263 VPHAD 267
           VP AD
Sbjct: 573 VPIAD 577



 Score =  181 bits (459), Expect = 7e-50
 Identities = 110/290 (37%), Positives = 172/290 (59%), Gaps = 21/290 (7%)

Query: 260 MSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGPFSPKREFRAVDDVSFTLRRGET 319
           M+ + HA A  AP NA +   +L++  LS  +   SG        +A+  +SFT+ +GE 
Sbjct: 1   MTDIMHAGAATAPGNAPRP--VLEIDDLSVSFSGRSGTH------QALKGISFTVNKGEV 52

Query: 320 VGIVGESGSGKSSIARMLLRLNEPTS----GAALFAGED-----IFELKGKALDGFRRR- 369
           V +VGESGSGKS  +  ++ L   ++    GA  F   D     +  +K +A    R R 
Sbjct: 53  VAVVGESGSGKSVTSLAVMGLLADSANIERGALRFTARDGKQHDLLSMKAEARRKLRGRD 112

Query: 370 VQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHAAR-- 427
           + M+FQ+P  S+NP + V   ++E    H+ I      +++  ELL  V +         
Sbjct: 113 LAMIFQEPMTSLNPVLKVGDQLTEALLDHK-ICDAASADKKARELLHKVRIADVDRVMKS 171

Query: 428 HPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVF 487
           +PH  SGG RQR+ IA+ALA +P+L++ DE  +ALDV++Q +++++L DL+Q+  +S +F
Sbjct: 172 YPHSLSGGMRQRVMIAQALACDPQLLIADEPTTALDVTVQARILQILRDLQQQSDMSVLF 231

Query: 488 ITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVPQ 537
           ITHD+ +V + ADR++VM RG IVE+G  E +F +PQH YTQ+LL AVP+
Sbjct: 232 ITHDMGVVAEIADRVVVMYRGEIVEQGTVEQIFAAPQHPYTQSLLAAVPK 281