Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  408 bits (1048), Expect = e-118
 Identities = 221/538 (41%), Positives = 334/538 (62%), Gaps = 22/538 (4%)

Query: 5   DKPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDC 64
           D  +L +  L+++    G   R V DVSFD+ PGE   I+GESGSGK+++T  ++ L+  
Sbjct: 3   DNTLLTVRGLSLEVAGSGH--RVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLP- 59

Query: 65  PPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFES 124
           P   +  GS+++ G D+  L     R L G  I ++FQ+P+  LNP  T+GRQ+ E    
Sbjct: 60  PAIAVTGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLIL 119

Query: 125 HGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIAD 184
           H +      R+K++ +L RVGI + +  +  YPH+FSGG RQR+M+A  + LKP +LIAD
Sbjct: 120 HTKLSPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLIAD 179

Query: 185 EPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKA 244
           EPTTALD  +Q  ++EL+ +L R  G A+++I+HDL + A    RI+VM  G +VE G+ 
Sbjct: 180 EPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQGRT 239

Query: 245 EDVFTNPSHAYTRRLMSAVP------HADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGPF 298
           ED+   P H YT++L+S++P        D  KAP  +A+G V+      S   K      
Sbjct: 240 EDLLDAPRHPYTKKLLSSLPFRGEPRSIDTSKAPMVSARGIVVDYAGRKSLLKKA----- 294

Query: 299 SPKREFRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFEL 358
            PK   RA+  VS  +  GE V +VG SGSGK+++ R +  L + + G   F G +    
Sbjct: 295 KPK---RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRE---- 347

Query: 359 KGKALDGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELV 418
           + +  + +R   QMVFQDP+ S++PRM +++++ E   +    L +    +R +E LE V
Sbjct: 348 RNEDWNDYRLNCQMVFQDPYSSLDPRMTIQALVEEALRLVPG-LDQAAKRKRALETLEEV 406

Query: 419 GLKAEHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLR 478
           GL  ++A R+PH+ SGGQRQR+AIARA+A  P  ++ DE VSALDV+++ QV++L +DL+
Sbjct: 407 GLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQ 466

Query: 479 QRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVP 536
           +R G S +FI+HDL +V Q ADR++VMQ GRI+EEG+ + +F SP+  YT+ LL A+P
Sbjct: 467 KRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRRLLSAIP 524



 Score =  177 bits (449), Expect = 9e-49
 Identities = 107/270 (39%), Positives = 155/270 (57%), Gaps = 24/270 (8%)

Query: 7   PILRIDKLTVDF------LSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMG 60
           P++    + VD+      L +  P RA+  VS D+  GE + ++G SGSGK+    T+ G
Sbjct: 273 PMVSARGIVVDYAGRKSLLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAG 332

Query: 61  LIDCPPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAE 120
           L+    G I      F G +  R +D     LN +   M+FQDP + L+P  T+   + E
Sbjct: 333 LVKESEGHIR-----FQGRE--RNEDWNDYRLNCQ---MVFQDPYSSLDPRMTIQALVEE 382

Query: 121 VFESHGEGEGGAVRDKVVRLLERVGIPEADERIDY---YPHQFSGGQRQRVMIAMAIALK 177
                   +  A R + +  LE VG+      +DY   YPH+ SGGQRQRV IA AIA +
Sbjct: 383 ALRLVPGLDQAAKRKRALETLEEVGLG-----VDYAGRYPHELSGGQRQRVAIARAIARR 437

Query: 178 PDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGK 237
           P  LIADEP +ALDV+V+AQ+L+L  DLQ+  G + + I+HDL V   +ADR++VM  G+
Sbjct: 438 PRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGR 497

Query: 238 VVESGKAEDVFTNPSHAYTRRLMSAVPHAD 267
           ++E G  + +F +P  AYTRRL+SA+P  D
Sbjct: 498 IIEEGDRDTIFDSPREAYTRRLLSAIPALD 527