Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 324 a.a., Ribose import permease protein RbsC from Xanthobacter sp. DMC5

 Score =  138 bits (348), Expect = 2e-37
 Identities = 89/304 (29%), Positives = 155/304 (50%), Gaps = 9/304 (2%)

Query: 2   DIQRLKPHLPWITLTVLVAIVGMADPGFLKPQNLMSLAGDIVPLFIMALGLTFAIYIGGI 61
           D+Q+L   L  +   +L   + +A   F    N++++      LF +A GLT  I  GG+
Sbjct: 19  DMQQLIYRL--LAAGLLCVALSVATDAFFTTNNILNVLRQASLLFFLASGLTLVILTGGL 76

Query: 62  DLSAQSMANMVTVIASVYLASMG--AWVALLCVAAGFLLGTLSGYITTRLYVPSFISTLA 119
           DLS  +   +   +A+  + + G  A   L  +A G  +G  +G +  +L +PSFI+T  
Sbjct: 77  DLSVGANIGLSACLAATVIKATGSPALGTLTGLATGCAIGVCNGLMVAKLRIPSFIATYG 136

Query: 120 VGGVAFSVAQW-LSGQRALNMDAAQRNETFGWMIGRTWGVPNELLIAAVLLLVCLFIERR 178
           +  V   +  + ++G+         R    G+ +G    +P  + +    L+      +R
Sbjct: 137 MLWVLHGLTYYYMAGETIHGFPPGFRQIGSGYFLG----IPIPVYLMIGFLIAGSVFAQR 192

Query: 179 TILGRALKAVGAGELAAAASGLNVARYKILAFAISGALAAIAGLLFAVKLSGGAPTIANG 238
           T+ G+ + A+GA  +AA  +G+ V R  IL +A SGA+A +A ++F  +L+     I   
Sbjct: 193 TVWGQQIYAIGANPVAARLTGIPVDRRLILVYAFSGAMAGVASIVFLARLNSAEGDIGEA 252

Query: 239 FLLPAIVAVLVGGTPLTGGVGGVLNTVIGTLIVAVIRASMLYFEIDATQQQMVFGIVLIG 298
             LPAI AVL+GG  L GGVG V  T +G LI+ ++   M    ++++ Q +V G+++I 
Sbjct: 253 MTLPAIAAVLIGGASLFGGVGSVFGTFVGALILTLVLNGMNLLAVNSSWQPLVTGVIVIF 312

Query: 299 AIAL 302
           A+ L
Sbjct: 313 AVWL 316