Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  130 bits (327), Expect = 4e-35
 Identities = 94/307 (30%), Positives = 154/307 (50%), Gaps = 19/307 (6%)

Query: 11  PWITLTVLVAIVGMADPGFLKPQNLMSLAGDIVPLFIMALGLTFAIYIGGIDLSAQS-MA 69
           P++ L V+  ++ +A   FL   NL ++A  +    I+A+G+T  I  GGIDLS    MA
Sbjct: 34  PFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMA 93

Query: 70  NMVTVIASVYLASMGAWVALLCVAAGFLLGTL----SGYITTRLYVPSFISTLAVGGVAF 125
              T+ A + +A +   +A   + AG L+G      +G     L++P  I TLA  G+A 
Sbjct: 94  LSGTLTAGLMVAGLPPGLA---IGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIA- 149

Query: 126 SVAQWLSGQRALNMDAAQRNETFGWM--IGRT--WGVPNELLIAAVLLLVCLFIERRTIL 181
                  G   +  D    +    W    GR   +G+   +LI  +  LV   + + T +
Sbjct: 150 ------RGLGLMYTDGYPISGLPDWFAFFGRESLFGIQVPILIMLLTYLVAYVLLQHTRI 203

Query: 182 GRALKAVGAGELAAAASGLNVARYKILAFAISGALAAIAGLLFAVKLSGGAPTIANGFLL 241
           GR + A+G  E A   SG+  AR+K+L + ISG  AAIAGL+   +L  G P     F L
Sbjct: 204 GRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFEL 263

Query: 242 PAIVAVLVGGTPLTGGVGGVLNTVIGTLIVAVIRASMLYFEIDATQQQMVFGIVLIGAIA 301
            AI AV++GG  + GG G ++ T++G +++ V+   +    +    Q ++ G +++ AI 
Sbjct: 264 DAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIF 323

Query: 302 LTIDRAK 308
           ++  R K
Sbjct: 324 ISRQRHK 330