Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  143 bits (360), Expect = 6e-39
 Identities = 90/298 (30%), Positives = 149/298 (50%), Gaps = 9/298 (3%)

Query: 15  LTVLVAIVGMADPGFLKPQNLMSLAGDIVPLFIMALGLTFAIYIGGIDLSAQSMANMVTV 74
           L  ++ +       F       +LA  I  L ++A+G+TF + IGGIDLS  S+  +   
Sbjct: 33  LLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSVLALAAS 92

Query: 75  IASVYLASMGAWV---ALLCVAAGFLLGTLSGYITTRLYVPSFISTLAVGGVAFSVAQWL 131
             SV +   G  V   ALL +A   L G+++G +T    +PSFI +L V  +A  +A   
Sbjct: 93  TVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFIVSLGVLEMARGLAYQF 152

Query: 132 SGQRALNMDAAQRNETFGWMIGRT-WGVPNELLIAAVLLLVCLFIERRTILGRALKAVGA 190
           +  R      A   + + W      +GV    +IA +++++   +  RT+ GR L  +G 
Sbjct: 153 TDSRT-----AYIGDAYAWFSNPVAFGVSPAFIIALLVIVLAQLVLTRTVFGRYLIGIGT 207

Query: 191 GELAAAASGLNVARYKILAFAISGALAAIAGLLFAVKLSGGAPTIANGFLLPAIVAVLVG 250
            E A   +G++   YK+L FA+ G LA +A L    +L    P   +G  L  I AV++G
Sbjct: 208 NEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQVIAAVVIG 267

Query: 251 GTPLTGGVGGVLNTVIGTLIVAVIRASMLYFEIDATQQQMVFGIVLIGAIALTIDRAK 308
           GT L GG G V++T  G LI++V+ A +         ++++ G V++ A+ L   R++
Sbjct: 268 GTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVLDTYRSR 325