Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 334 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  119 bits (298), Expect = 1e-31
 Identities = 89/270 (32%), Positives = 138/270 (51%), Gaps = 13/270 (4%)

Query: 17  VLVAIVG-MADPGFLKPQNLMSLAGDIVPLFIMALGLTFAIYIGGIDLSAQSMANM---V 72
           VL+ I G + +  F    N M++      + I+A+G+ F I  GGIDLS  SMA +   V
Sbjct: 32  VLLCIAGTLLNREFATVDNAMNVLTRTAFIGIIAVGMCFVIISGGIDLSVGSMAALIAGV 91

Query: 73  TVIASVYLASMGAW----VALLCVAAGFLLGTL----SGYITTRLYVPSFISTLAVGGVA 124
            ++    +A +G W    V ++ +AA  LLG L     G + TR  +  FI TL   G+ 
Sbjct: 92  VILLMNRIAPLG-WPPVAVVMVGMAAAVLLGALFGLAHGLLVTRGRIEPFIVTLGTLGIF 150

Query: 125 FSVAQWLSGQRALNMDAAQRNETFGWMIGRTWGVPNELLIAAVLLLVCLFIERRTILGRA 184
            +   + +   AL +D A  +       G   GVP  + I  ++ L    +  RT  GR 
Sbjct: 151 RAYLTYFADGGALALDNALADAYGPVYYGSLLGVPVPVWIFVLVALAGALLLNRTAYGRY 210

Query: 185 LKAVGAGELAAAASGLNVARYKILAFAISGALAAIAGLLFAVKLSGGAPTIANGFLLPAI 244
           ++A+G+ E  A  + ++V R K+L + + G    IA LL+  +L   +PT    + L AI
Sbjct: 211 VQAIGSNEQVARYAAVDVDRIKVLTYTLLGVCVGIATLLYVPRLGSASPTTGLLWELEAI 270

Query: 245 VAVLVGGTPLTGGVGGVLNTVIGTLIVAVI 274
            AV+VGGT L GG G +  TVIG ++++VI
Sbjct: 271 AAVIVGGTALRGGAGSIGGTVIGAILLSVI 300