Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 328 a.a., L-arabinose ABC transporter permease AraH from Dickeya dianthicola ME23

 Score =  118 bits (296), Expect = 2e-31
 Identities = 85/288 (29%), Positives = 145/288 (50%), Gaps = 15/288 (5%)

Query: 27  PGFLKPQNLMSLAGDIVPLFIMALGLTFAIYIGGIDLSAQSMANMVTVIASVYL-ASMGA 85
           P F    N+  L   I    ++A G+ F +  G  DLS  S+     V  +V +  S   
Sbjct: 43  PNFATFVNMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINVSESL 102

Query: 86  WVALLCVAAGFLLGT----LSGYITTRLYVPSFISTLAVGGVAFSVAQWLSGQRALNMDA 141
           W+    V AG LLG     L+G++  +L + + I+TLA   +   +A  +S  +A+ ++ 
Sbjct: 103 WLG---VGAGLLLGVAFGLLNGFVIAQLKINALITTLATMQIVRGLAYIISDGKAVGIED 159

Query: 142 AQRNETFGWMIGRTW-GVPNELLIAAVLLLVCLFIERRTILGRALKAVGAGELAAAASGL 200
            +R  T G+     W G+P  + +  + +++   +  +T  GR   A+G  E AA  +G+
Sbjct: 160 -ERFFTLGYA---NWLGLPAPIWLTVICMVLFGLLLNKTTFGRNTLAIGGNEEAARLAGV 215

Query: 201 NVARYKILAFAISGALAAIAGLLFAVKLSGGAPTIANGFLLPAIVAVLVGGTPLTGGVGG 260
            V R KI+ F +SG ++A AG++ A +++ G P  + G+ L  I A ++GG  L GG+G 
Sbjct: 216 PVVRTKIIIFGLSGLVSAAAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGK 275

Query: 261 VLNTVIGTLIVAVIRASMLYFEIDATQQQMVFGIVLIGAIALTIDRAK 308
           +   V G LI+  +  +M    I    Q +V G++L+ A+    DR K
Sbjct: 276 ISYVVAGVLILGTVENAMNLLNISPFAQYVVRGLILLAAV--VFDRYK 321