Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  142 bits (358), Expect = 1e-38
 Identities = 92/312 (29%), Positives = 161/312 (51%), Gaps = 26/312 (8%)

Query: 13  ITLTVLVAIVGMADPGFLKPQNLMSLAGDIVPLFIMALGLTFAIYIGGIDLSAQSMANMV 72
           I L +L  ++ +    FL   N  ++   +     +++G+T  I   GIDLS  S+  + 
Sbjct: 11  IALIILCLVLSLLSDRFLTLANGWNVMRQVSVNICISVGMTLVILTAGIDLSVGSILALC 70

Query: 73  TVIAS---------------VYLASMGAWVALLCVAAGFLLGTLSGYITTRLYVPSFIST 117
             + +               +  A +GA   +L V  GF LG  +G+  TR  VP F++T
Sbjct: 71  GAVTASLIKNGIAVEGLNLHIGFAPLGA--VILGVGLGFGLGWFNGWTITRFKVPPFVAT 128

Query: 118 LAVGGVAFSVAQWLSGQRALNMDAAQRNETFGWMIGRTW--GVPNELLIAAVLLLVCLFI 175
           LA+  +A  +    +G   +N       E F ++ G  W  G+P  + I AV++ + + +
Sbjct: 129 LAMLTIARGLTMLWTGGFPIN----GLGEDFAFL-GTGWFLGIPMPVWITAVIVALAVLL 183

Query: 176 ERRTILGRALKAVGAGELAAAASGLNVARYKILAFAISGALAAIAGLLFAVKLSGGAPTI 235
            ++T  GR + A+G  E AA  SG+N++R K+  +AI+G LAA+ G++   +L    P  
Sbjct: 184 TKKTKFGRYVYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSRLDSAQPNA 243

Query: 236 ANGFLLPAIVAVLVGGTPLTGGVGGVLNTVIGTLIVAVIRASMLYFEIDATQQQMVFGIV 295
              + L AI AV++GGT L+GG G ++  V+G +I+ V+   ++   +    QQ+V G V
Sbjct: 244 GISYELDAIAAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLNVSPFWQQVVKGAV 303

Query: 296 LIGAIALTIDRA 307
           ++  +A+ ID+A
Sbjct: 304 IL--LAVVIDKA 313