Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 536 a.a., Periplasmic dipeptide transport protein from Xanthobacter sp. DMC5

 Score =  132 bits (333), Expect = 2e-35
 Identities = 117/450 (26%), Positives = 198/450 (44%), Gaps = 29/450 (6%)

Query: 52  NIYEALMARTATGDLVPGLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAVVASVLRV 111
           N+Y+ L+    TG   P LA       D R+  F+LR+G+ +H+G PF A  V  S+L V
Sbjct: 61  NVYDGLVTYDGTGAPRPQLAESYEQAPDGRSITFRLRKGVTWHDGVPFTAADVKYSILEV 120

Query: 112 IDPANNSEQMAYLGPLSGAEKVDDLAVRIITSAPDPILPARM--YWLKMVPAAYSKNATA 169
           +   +      Y   L   E  DD  V +  + P P++ + +     +++P    +    
Sbjct: 121 VKKTHPRGIGTY-SQLQDIETPDDHTVILRLAKPSPVIWSALNSSETQILPKHLYEGTDP 179

Query: 170 IAE----KPVGTGPYKFGTWDRGNSITMTANTDYW-GGEPQIDDVTYRFVSEAGTRLSGL 224
           +      KP+GTGP+ F  W RG+ +T+  N +YW  G+P +D +T+RFV +AG R + L
Sbjct: 180 LTNPWNTKPIGTGPFIFKEWVRGSHVTLERNPNYWDAGKPYLDRLTFRFVPDAGARAAAL 239

Query: 225 VAGEFDVV---------VNLLPEFADSVPQAKSVSGLETSVII-LGVDNPAVKDVRVRRA 274
             GE   V         V  L +  D V + +    +     +   +  P  +DVRVRRA
Sbjct: 240 ETGEAQYVPLSPVPLSDVERLAKRPDLVVETRGWEAVAPVFFLDFNMRRPQFQDVRVRRA 299

Query: 275 LNMAIDRHALAESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKLIAEAGAA-- 332
           + +AID+ ALA +++ G A+  TG +           L  + YDP+ A+ L+ EAG    
Sbjct: 300 IALAIDKKALARTVWYGFAEPATGPVPAFQTAFAATGLPQYDYDPKKAEALLDEAGLKRG 359

Query: 333 --GTTIDLVGEAGRWLKD-RELIEAVAAYWTEVGLKVNVEILEFSVYLDRI---FDMGNR 386
             G  +     +  +  D +   E +     +VG++V +   +   +L +I   +D    
Sbjct: 360 PDGVRLRFNHVSIPYGDDFKRSGEFIRQQLKKVGIEVELLNYDLPTFLRKIYTEYDFDTL 419

Query: 387 PDSYFVLNSNELFDADREMAFAYEPG---QGGASNSDKALGEAIRAARSEVDGEKRKAAY 443
              Y      ++    R  +    PG      +  S+  +   + AA  E D +KRKA  
Sbjct: 420 NAYYAAFADPQIGVQRRFWSQTIRPGSAWSNASGYSNPKVDALLEAAAVEPDPQKRKALL 479

Query: 444 AVITKKLHDEAYDVPLLNHQDIYGMSEKME 473
                 +  E   + LL  +     S +++
Sbjct: 480 GEFQLIVQTELPSISLLELKQFRVWSSRLK 509