Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  140 bits (353), Expect = 1e-37
 Identities = 128/495 (25%), Positives = 218/495 (44%), Gaps = 44/495 (8%)

Query: 8   LAAGLAVLFASTSWAQSITVAIGSEPSTLDPQLRDDGGERQVN-DNIYEALMARTATG-D 65
           LAAGL         A ++     + P+  DP     G +   + + ++  L      G +
Sbjct: 11  LAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFKRGGTE 70

Query: 66  LVPGLAADAPTQVDARTWQFKLREGIKFHNGE------PFNADAVVASVLRVIDPANNSE 119
           + PGLA       D  T+ F LR+G+KFH  +       FNAD V+ +  R++D  +   
Sbjct: 71  VEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPFR 130

Query: 120 Q-----------MAYLGPLSGAEKVDDLAVRIITSAPDP--ILPARMYWLKMVPAAYSKN 166
           Q           M     +   +K+DD  VR   +  D   +    M +  +  A Y+  
Sbjct: 131 QAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAEYAAQ 190

Query: 167 ------ATAIAEKPVGTGPYKFGTWDRGNSITMTANTDYWGGEP-QIDDVTYRFVSEAGT 219
                 A  I +KPVGTGP+ F  + + + I   AN  YW  E  ++D++ +    +A +
Sbjct: 191 LLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAITPDAAS 250

Query: 220 RLSGLVAGEFDVVVNLLPEFADSVPQAKSVSGLETSVIILG-----VDNPAVKDVRVRRA 274
           RL  L AGE  V     P   + + Q  ++  L+ +   LG     V +P +  ++VR+A
Sbjct: 251 RLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHPPLDQLKVRQA 310

Query: 275 LNMAIDRHALAESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKLIAEAGAA-G 333
           L+MAID+ A+ ++++    ++    L  P  + Y+ ++++ PYDP  AK L+ EAG A G
Sbjct: 311 LDMAIDKPAIIKAVYQSAGQLAQNALP-PAQWSYDPTIKDAPYDPTKAKALLKEAGVAPG 369

Query: 334 TTIDLVGEAGRWLKD---RELIEAVAAYWTEVGLKVNVEILEFSVYLDRIFDMGNRPDSY 390
           TT++L     +   +   R   + +   W +VG+K N+   E+  Y+ R        D+ 
Sbjct: 370 TTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRA--KNGEHDAM 427

Query: 391 FVLNSNELFDADREMAFAYEPGQGGASNSDK----ALGEAIRAARSEVDGEKRKAAYAVI 446
               + +  D D  +   Y       SN  K    A  + ++ A+   D E+R   Y   
Sbjct: 428 IYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCNPAYDKLVQQAKVSNDREQRIKWYQQA 487

Query: 447 TKKLHDEAYDVPLLN 461
            K L ++    P+ N
Sbjct: 488 QKILKEQVPITPIAN 502